RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 GPRASP2Q96D09 838 aa15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 ZNF274Q96GC6 653 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 TMX3Q96JJ7 454 aa15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 YME1L1Q96TA2 773 aa15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 SIP14410 1827 aa15.71■□□□□ 0.1
PDLIM2-213ENST00000448520 PFKFB2O60825 505 aa15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 METAP2P50579 478 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 ARHGAP4P98171 946 aa15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 RTN1Q16799 776 aa15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 TAF2Q6P1X5 1199 aa15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 CCDC83Q8IWF9 413 aa15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 SRBD1Q8N5C6 995 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 FANCBQ8NB91 859 aa15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 SEPT1Q8WYJ6 367 aa15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 SLKQ9H2G2 1235 aaPredicted RBP15.7■□□□□ 0.1
PDLIM2-213ENST00000448520 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 K7ELQ4 463 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 RPLP2P05387 115 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 ADD1P35611 737 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 EPC2Q52LR7 807 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 RSPH3Q86UC2 560 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 HSCBQ8IWL3 235 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 LMBR1Q8WVP7 490 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 MRPL38Q96DV4 380 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 C17orf80Q9BSJ5 609 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 IFIH1Q9BYX4 1025 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 UBE2ZQ9H832 354 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 ERAP1Q9NZ08 941 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 MYO7AQ13402 2215 aa15.69■□□□□ 0.1
PDLIM2-213ENST00000448520 NID2Q14112 1375 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 SPDYE3A6NKU9 549 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 UPP2O95045 317 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 CTSHP09668 335 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 KCNA2P16389 499 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 TCF7P36402 384 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 SP4Q02446 784 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 LEXMQ3ZCV2 418 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 TRIM50Q86XT4 487 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 TEX2Q8IWB9 1127 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 CCDC82Q8N4S0 544 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 TNPO1Q92973 898 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 GTF3C6Q969F1 213 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 ZSCAN31Q96LW9 406 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 SMARCAD1Q9H4L7 1026 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 EHMT1Q9H9B1 1298 aa15.68■□□□□ 0.1
PDLIM2-213ENST00000448520 H3BNC9 293 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 ATP9AO75110 1047 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 CTDNEP1O95476 244 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 CHRNA1P02708 482 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 MCM2P49736 904 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 GPM6BQ13491 265 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 PUS10Q3MIT2 529 aaKnown RBP15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 TMTC3Q6ZXV5 915 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 TMEM192Q8IY95 271 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 JADE2Q9NQC1 790 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 UBIAD1Q9Y5Z9 338 aa15.67■□□□□ 0.1
PDLIM2-213ENST00000448520 GSTTP1A0A1W2PQM5 241 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 hCG_1642624A0A1W2PR95 340 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 RRN3P2A6NIE6 340 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 JAK2O60674 1132 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 RB1P06400 928 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 ITGB5P18084 799 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 ANP32AP39687 249 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 RCAN1P53805 252 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 FUT2Q10981 343 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 PPFIA1Q13136 1202 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 MTMR1Q13613 665 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 NTRK3Q16288 839 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 TIGD5Q53EQ6 642 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 SPRYD3Q8NCJ5 442 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 GLG1Q92896 1179 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 PHKBQ93100 1093 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 OSBPL7Q9BZF2 842 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 EPHX3Q9H6B9 360 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 PCDHA6Q9UN73 950 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 RWDD3Q9Y3V2 267 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 TELO2Q9Y4R8 837 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 PCDHA8Q9Y5H6 950 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 COL4A4P53420 1690 aaPredicted RBP15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 CNTNAP5Q8WYK1 1306 aa15.66■□□□□ 0.1
PDLIM2-213ENST00000448520 TTC3P53804 2025 aa15.65■□□□□ 0.1
PDLIM2-213ENST00000448520 MBLAC1A4D2B0 266 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-213ENST00000448520 NCK2O43639 380 aa15.65■□□□□ 0.1
PDLIM2-213ENST00000448520 KCNA5P22460 613 aa15.65■□□□□ 0.1
PDLIM2-213ENST00000448520 FIBCD1Q8N539 461 aa15.65■□□□□ 0.1
PDLIM2-213ENST00000448520 BANK1Q8NDB2 785 aa15.65■□□□□ 0.1
PDLIM2-213ENST00000448520 ARIH1Q9Y4X5 557 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-213ENST00000448520 ENPP3O14638 875 aa15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 FOSP01100 380 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 MGAT3Q09327 533 aa15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 CUL4AQ13619 759 aa15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 GRIK4Q16099 956 aa15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 TMEM31Q5JXX7 168 aa15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 FAM43BQ6ZT52 329 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 FAM178BQ8IXR5 827 aa15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 NSUN7Q8NE18 718 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms