RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 FAM217BQ9NTX9 383 aaPredicted RBP20.93■□□□□ 0.94
HMGA1-205ENST00000447654 EHD2Q9NZN4 543 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 VPS54Q9P1Q0 977 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 XDHP47989 1333 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 SCN7AQ01118 1682 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 ADAM9Q13443 819 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 HLTFQ14527 1009 aaKnown RBP eCLIP20.93■□□□□ 0.94
HMGA1-205ENST00000447654 FKBP15Q5T1M5 1219 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 CROCCP2Q86T23 111 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 ADSSL1Q8N142 457 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 EPSTI1Q96J88 318 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 RAB3IPQ96QF0 476 aaPredicted RBP20.93■□□□□ 0.94
HMGA1-205ENST00000447654 SLC26A6Q9BXS9 759 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 ZWILCHQ9H900 591 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 NARFQ9UHQ1 456 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 TAOK2Q9UL54 1235 aa20.93■□□□□ 0.94
HMGA1-205ENST00000447654 UBE2Q2LH0YL09 131 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 O00370 1275 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 SART1O43290 800 aaKnown RBP20.92■□□□□ 0.94
HMGA1-205ENST00000447654 RPS6KA4O75676 772 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 LIFRP42702 1097 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 GNAQP50148 359 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 ASRGL1Q7L266 308 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 FAM114A1Q8IWE2 563 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 ZNF384Q8TF68 577 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 INPP4AQ96PE3 977 aaPredicted RBP20.92■□□□□ 0.94
HMGA1-205ENST00000447654 MYL10Q9BUA6 226 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 ZSWIM5Q9P217 1185 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 LRP2BPQ9P2M1 347 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 MYH7BA7E2Y1 1941 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 RAD51CO43502 376 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 ABCD1P33897 745 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 FAM133BQ5BKY9 247 aaKnown RBP20.92■□□□□ 0.94
HMGA1-205ENST00000447654 SLC10A5Q5PT55 438 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 SPICE1Q8N0Z3 855 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 ATXN2LQ8WWM7 1075 aaKnown RBP20.92■□□□□ 0.94
HMGA1-205ENST00000447654 NAPBQ9H115 298 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 DMAP1Q9NPF5 467 aaPredicted RBP20.92■□□□□ 0.94
HMGA1-205ENST00000447654 ABCF2Q9UG63 623 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 PHF24Q9UPV7 400 aa20.92■□□□□ 0.94
HMGA1-205ENST00000447654 SPATA31A6Q5VVP1 1343 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 DEXIO95424 95 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 MMEP08473 750 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 CASP1P29466 404 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 MMP13P45452 471 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 SH3BGRP55822 239 aaPredicted RBP20.91■□□□□ 0.94
HMGA1-205ENST00000447654 USP38Q8NB14 1042 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 SH3TC2Q8TF17 1288 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 MAIP1Q8WWC4 291 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 KIFAP3Q92845 792 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 IFT43Q96FT9 208 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 LY9Q9HBG7 655 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 SLC4A4Q9Y6R1 1079 aa20.91■□□□□ 0.94
HMGA1-205ENST00000447654 BACH1O14867 736 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 UBOX5O94941 541 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 OAS1P00973 400 aaKnown RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 MAGEA1P43355 309 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 PDE6CP51160 858 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 ERVK-9P63128 1117 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 SETDB1Q15047 1291 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 TSNAXIP1Q2TAA8 658 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 KRT71Q3SY84 523 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 ARMC3Q5W041 872 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 ARHGAP27Q6ZUM4 889 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 FAM84BQ96KN1 310 aaPredicted RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 FAM192AQ9GZU8 254 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 LUC7LQ9NQ29 371 aaKnown RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 CCNL1Q9UK58 526 aaPredicted RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 THSD7AQ9UPZ6 1657 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 SPDYE5A6NIY4 337 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 RPN1P04843 607 aaKnown RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 PCK1P35558 622 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 PRCPP42785 496 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 IRGCQ6NXR0 463 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 PDXDC2PQ6P474 469 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 KRT26Q7Z3Y9 468 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 MICU3Q86XE3 530 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 ZSCAN29Q8IWY8 852 aaPredicted RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 SDR42E1Q8WUS8 393 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 LZICQ8WZA0 190 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 ARHGEF1Q92888 912 aaKnown RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 PGM2Q96G03 612 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 MS4A14Q96JA4 679 aa20.9■□□□□ 0.94
HMGA1-205ENST00000447654 GOLGB1Q14789 3259 aaKnown RBP20.9■□□□□ 0.94
HMGA1-205ENST00000447654 NCK2O43639 380 aa20.89■□□□□ 0.94
HMGA1-205ENST00000447654 KRT16P08779 473 aa20.89■□□□□ 0.94
HMGA1-205ENST00000447654 CALB2P22676 271 aa20.89■□□□□ 0.94
HMGA1-205ENST00000447654 SP100P23497 879 aaPredicted RBP20.89■□□□□ 0.94
HMGA1-205ENST00000447654 OR2W6PQ8NHA6 318 aa20.89■□□□□ 0.94
HMGA1-205ENST00000447654 PSMB7Q99436 277 aa20.89■□□□□ 0.94
HMGA1-205ENST00000447654 TUBGCP2Q9BSJ2 902 aa20.89■□□□□ 0.94
HMGA1-205ENST00000447654 FBXL5Q9UKA1 691 aa20.89■□□□□ 0.94
HMGA1-205ENST00000447654 CHD4Q14839 1912 aa20.89■□□□□ 0.93
HMGA1-205ENST00000447654 PNPLA7Q6ZV29 1317 aa20.89■□□□□ 0.93
HMGA1-205ENST00000447654 SNX3O60493 162 aa20.89■□□□□ 0.93
HMGA1-205ENST00000447654 CYP7A1P22680 504 aa20.89■□□□□ 0.93
HMGA1-205ENST00000447654 ARHGAP18Q8N392 663 aa20.89■□□□□ 0.93
HMGA1-205ENST00000447654 UBLCP1Q8WVY7 318 aaPredicted RBP20.89■□□□□ 0.93
HMGA1-205ENST00000447654 MKL1Q969V6 931 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms