RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 SMIM10L2BP0DMW5 78 aa24.77■■□□□ 1.56
APOE-204ENST00000446996 MCM7P33993 719 aa24.77■■□□□ 1.56
APOE-204ENST00000446996 BECN1Q14457 450 aa24.77■■□□□ 1.56
APOE-204ENST00000446996 GDF6Q6KF10 455 aaPredicted RBP24.77■■□□□ 1.56
APOE-204ENST00000446996 SWSAP1Q6NVH7 229 aa24.77■■□□□ 1.56
APOE-204ENST00000446996 GJA10Q969M2 543 aa24.77■■□□□ 1.56
APOE-204ENST00000446996 TRPV6Q9H1D0 765 aa24.77■■□□□ 1.56
APOE-204ENST00000446996 FOXD4L1Q9NU39 408 aa24.77■■□□□ 1.56
APOE-204ENST00000446996 PCDHA12Q9UN75 941 aa24.77■■□□□ 1.56
APOE-204ENST00000446996 C17orf102A2RUQ5 167 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 VPS37CA5D8V6 355 aaPredicted RBP24.76■■□□□ 1.55
APOE-204ENST00000446996 TRIM43BA6NCK2 446 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 H0YGN5 161 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 LAD1O00515 517 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 STX6O43752 255 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 CHMP4BP1P59074 171 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 ZNF174Q15697 407 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 PTGISQ16647 500 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 SH3RF1Q7Z6J0 888 aa24.76■■□□□ 1.55
APOE-204ENST00000446996 TRIM43Q96BQ3 446 aaPredicted RBP24.76■■□□□ 1.55
APOE-204ENST00000446996 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.76■■□□□ 1.55
APOE-204ENST00000446996 TRMT13Q9NUP7 481 aaKnown RBP24.76■■□□□ 1.55
APOE-204ENST00000446996 CEP290O15078 2479 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 RRN3P2A6NIE6 340 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 HBP1O60381 514 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 ADAM17P78536 824 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 SPIRE1Q08AE8 756 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 PLCB4Q15147 1175 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 EPHA7Q15375 998 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 PDXDC2PQ6P474 469 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 C4orf32Q8N8J7 132 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 ATP8B4Q8TF62 1192 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 TMEM60Q9H2L4 133 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 PRDM5Q9NQX1 630 aaPredicted RBP24.75■■□□□ 1.55
APOE-204ENST00000446996 GABBR1Q9UBS5 961 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 ZMYND8Q9ULU4 1186 aaPredicted RBP24.75■■□□□ 1.55
APOE-204ENST00000446996 NOD1Q9Y239 953 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 IGSF9BQ9UPX0 1349 aa24.75■■□□□ 1.55
APOE-204ENST00000446996 DKC1O60832 514 aaKnown RBP eCLIP24.74■■□□□ 1.55
APOE-204ENST00000446996 TIMP1P01033 207 aa24.74■■□□□ 1.55
APOE-204ENST00000446996 OR52Z1P0C646 297 aa24.74■■□□□ 1.55
APOE-204ENST00000446996 PTK7Q13308 1070 aa24.74■■□□□ 1.55
APOE-204ENST00000446996 BBXQ8WY36 941 aaPredicted RBP24.74■■□□□ 1.55
APOE-204ENST00000446996 FAM167AQ96KS9 214 aa24.74■■□□□ 1.55
APOE-204ENST00000446996 ZSCAN16Q9H4T2 348 aaPredicted RBP24.74■■□□□ 1.55
APOE-204ENST00000446996 TTC12Q9H892 705 aaPredicted RBP24.74■■□□□ 1.55
APOE-204ENST00000446996 MTMR6Q9Y217 621 aa24.74■■□□□ 1.55
APOE-204ENST00000446996 LTBP2Q14767 1821 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 COL1A2P08123 1366 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 POTEB3A0JP26 581 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 CHMP2AO43633 222 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 RAG1P15918 1043 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 SYN1P17600 705 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 TXKP42681 527 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 RBL2Q08999 1139 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 PPFIA1Q13136 1202 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 BFSP2Q13515 415 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 POTEBQ6S5H4 581 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 CCDC155Q8N6L0 562 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 CAGE1Q8TC20 777 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 ATP6V0A1Q93050 837 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 CTAGE1Q96RT6 745 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 PCDHB6Q9Y5E3 794 aa24.73■■□□□ 1.55
APOE-204ENST00000446996 EML1O00423 815 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 PITPNM1O00562 1244 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 P4HBP07237 508 aaKnown RBP24.72■■□□□ 1.55
APOE-204ENST00000446996 ATP4AP20648 1035 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 MARK3P27448 753 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 PRPHP41219 470 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 ZNF484Q5JVG2 852 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 SERINC5Q86VE9 423 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 NOC4LQ9BVI4 516 aaKnown RBP24.72■■□□□ 1.55
APOE-204ENST00000446996 HIPK3Q9H422 1215 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 NRBP2Q9NSY0 501 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 SETD4Q9NVD3 440 aa24.72■■□□□ 1.55
APOE-204ENST00000446996 MBLAC1A4D2B0 266 aaPredicted RBP24.71■■□□□ 1.55
APOE-204ENST00000446996 BMP15O95972 392 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 RPLP2P05387 115 aaKnown RBP24.71■■□□□ 1.55
APOE-204ENST00000446996 INSRRP14616 1297 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 PSMC5P62195 406 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 RESTQ13127 1097 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 PTGDRQ13258 359 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 HIC1Q14526 733 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 GRIK4Q16099 956 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 MFSD5Q6N075 450 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 NEK9Q8TD19 979 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 PPP1R13LQ8WUF5 828 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 LMBR1Q8WVP7 490 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 LBHD1Q9BQE6 289 aaPredicted RBP24.71■■□□□ 1.55
APOE-204ENST00000446996 TRPC6Q9Y210 931 aa24.71■■□□□ 1.55
APOE-204ENST00000446996 CYP2C9P11712 490 aa24.7■■□□□ 1.54
APOE-204ENST00000446996 GDF15Q99988 308 aa24.7■■□□□ 1.54
APOE-204ENST00000446996 CEP131Q9UPN4 1083 aa24.7■■□□□ 1.54
APOE-204ENST00000446996 TREHO43280 583 aa24.69■■□□□ 1.54
APOE-204ENST00000446996 ZNF862O60290 1169 aa24.69■■□□□ 1.54
APOE-204ENST00000446996 CAND2O75155 1236 aa24.69■■□□□ 1.54
APOE-204ENST00000446996 ITGB8P26012 769 aa24.69■■□□□ 1.54
APOE-204ENST00000446996 BMP8BP34820 402 aa24.69■■□□□ 1.54
APOE-204ENST00000446996 QARSP47897 775 aaKnown RBP24.69■■□□□ 1.54
APOE-204ENST00000446996 FXR2P51116 673 aaKnown RBP eCLIP24.69■■□□□ 1.542e-8■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms