RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 AP2B1P63010 937 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 CDR2Q01850 454 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 CCDC17Q96LX7 622 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 AS3MTQ9HBK9 375 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 XDHP47989 1333 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 PTPRMP28827 1452 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 ERVV-1B6SEH8 477 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 ACTN1P12814 892 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 NT5C2P49902 561 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 ALKBH5Q6P6C2 394 aaKnown RBP20.06■□□□□ 0.8
SHANK3-203ENST00000445220 CRLF3Q8IUI8 442 aa20.06■□□□□ 0.8
SHANK3-203ENST00000445220 FOSP01100 380 aaPredicted RBP20.05■□□□□ 0.8
SHANK3-203ENST00000445220 KCNJ6P48051 423 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 POLA2Q14181 598 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 C1orf146Q5VVC0 180 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 RFX6Q8HWS3 928 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 CCDC127Q96BQ5 260 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 ARHGAP31Q2M1Z3 1444 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 HIPK4Q8NE63 616 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 RUBCNQ92622 972 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 PGBD1Q96JS3 809 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 NDE1Q9NXR1 346 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 TLR7Q9NYK1 1049 aaKnown RBP20.05■□□□□ 0.8
SHANK3-203ENST00000445220 STXBP3O00186 592 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 RAPH1Q70E73 1250 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 CENPUQ71F23 418 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 FAM186BQ8IYM0 893 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 ZNF711Q9Y462 761 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 GFPT2O94808 682 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 VSNL1P62760 191 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 PPP1R2P3Q6NXS1 205 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 EPN3Q9H201 632 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 SNX24Q9Y343 169 aa20.05■□□□□ 0.8
SHANK3-203ENST00000445220 ESYT2A0FGR8 921 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 PALMO75781 387 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 GCFC2P16383 781 aaKnown RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 ZFXP17010 805 aaPredicted RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 ADD2P35612 726 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 CUL3Q13618 768 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 RESP18Q5W5W9 173 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 SMYD2Q9NRG4 433 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 ADAMTS1Q9UHI8 967 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 MID2Q9UJV3 735 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 ASAP1Q9ULH1 1129 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 HEG1Q9ULI3 1381 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 H0YCG3 227 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 TAF12Q16514 161 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 ANO5Q75V66 913 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 WDR75Q8IWA0 830 aaKnown RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 ZBTB1Q9Y2K1 713 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 ABCC3O15438 1527 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 ENO4A6NNW6 628 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 RASA4BC9J798 803 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 EIF3HO15372 352 aaKnown RBP eCLIP20.04■□□□□ 0.83e-7■■□□□ 13.9
SHANK3-203ENST00000445220 RASA4O43374 803 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 DEPTORQ8TB45 409 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 PAIP2BQ9ULR5 123 aaKnown RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 KIAA1024Q9UPX6 916 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 SPATA31A6Q5VVP1 1343 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 CTIFO43310 598 aaKnown RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 HSPA8P11142 646 aaKnown RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 NECTIN1Q15223 517 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 TRIP13Q15645 432 aaPredicted RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 CERKLQ49MI3 558 aaPredicted RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 FBXO11Q86XK2 927 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 CACYBPQ9HB71 228 aaKnown RBP20.04■□□□□ 0.8
SHANK3-203ENST00000445220 KRT82Q9NSB4 513 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 PCDHA4Q9UN74 947 aa20.04■□□□□ 0.8
SHANK3-203ENST00000445220 hCG_2014768A0A024R1R8 64 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 EIF4E1BA6NMX2 242 aaKnown RBP20.03■□□□□ 0.8
SHANK3-203ENST00000445220 DLATP10515 647 aaKnown RBP20.03■□□□□ 0.8
SHANK3-203ENST00000445220 LIG4P49917 911 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 LRRC41Q15345 812 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 FAM102BQ5T8I3 360 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 NLGN1Q8N2Q7 840 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 GRID2IPA4D2P6 1211 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 KRT10P13645 584 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 IFNAR1P17181 557 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 GPATCH4Q5T3I0 446 aaKnown RBP20.03■□□□□ 0.8
SHANK3-203ENST00000445220 USPL1Q5W0Q7 1092 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 PRPF31Q8WWY3 499 aaKnown RBP20.03■□□□□ 0.8
SHANK3-203ENST00000445220 CNKSR1Q969H4 720 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 LGALS16A8MUM7 142 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 POLR2MP0CAP2 368 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 GRAMD1AQ96CP6 724 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 KCNF1Q9H3M0 494 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 TAF1DQ9H5J8 278 aaPredicted RBP20.03■□□□□ 0.8
SHANK3-203ENST00000445220 SEPT10Q9P0V9 454 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 ADGRL3Q9HAR2 1447 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 MCF2LO15068 1137 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 PYGBP11216 843 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 LRRC63Q05C16 580 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 KRT26Q7Z3Y9 468 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 RHOT2Q8IXI1 618 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 RIOK1Q9BRS2 568 aaKnown RBP20.03■□□□□ 0.8
SHANK3-203ENST00000445220 KIFC3Q9BVG8 833 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 ZNF408Q9H9D4 720 aa20.03■□□□□ 0.8
SHANK3-203ENST00000445220 IQGAP3Q86VI3 1631 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 PMS2P54278 862 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms