RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
HDAC8-215ENST00000444609 DACH1Q9UI36 760 aa12.04□□□□□ -0.48
HDAC8-215ENST00000444609 SLC4A4Q9Y6R1 1079 aa12.04□□□□□ -0.48
HDAC8-215ENST00000444609 SMG1Q96Q15 3661 aaKnown RBP12.04□□□□□ -0.48
HDAC8-215ENST00000444609 TTC3P53804 2025 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 LRP3O75074 770 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 HSDL1Q3SXM5 330 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 SPOUT1Q5T280 376 aaKnown RBP12.03□□□□□ -0.48
HDAC8-215ENST00000444609 LURAP1LQ8IV03 231 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 PJA1Q8NG27 643 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 MRPS27Q92552 414 aaKnown RBP12.03□□□□□ -0.48
HDAC8-215ENST00000444609 ENTPD7Q9NQZ7 604 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 SPATA6Q9NWH7 488 aaPredicted RBP12.03□□□□□ -0.48
HDAC8-215ENST00000444609 NOB1Q9ULX3 412 aaKnown RBP12.03□□□□□ -0.48
HDAC8-215ENST00000444609 CACNA1IQ9P0X4 2223 aa12.03□□□□□ -0.48
HDAC8-215ENST00000444609 NAV2Q8IVL1 2488 aa12.02□□□□□ -0.48
HDAC8-215ENST00000444609 H3BRB1 525 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 TM4SF5O14894 197 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 GDF9O60383 454 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 CLASP2O75122 1294 aaKnown RBP12.02□□□□□ -0.49
HDAC8-215ENST00000444609 LRRN2O75325 713 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.49
HDAC8-215ENST00000444609 GNAI2P04899 355 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 GNAT1P11488 350 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 ADD2P35612 726 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 MGAT3Q09327 533 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 POLA2Q14181 598 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 STXBP2Q15833 593 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 MYSM1Q5VVJ2 828 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 IL31Q6EBC2 164 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 SLC44A3Q8N4M1 653 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 MRPL43Q8N983 215 aaKnown RBP12.02□□□□□ -0.49
HDAC8-215ENST00000444609 COLGALT1Q8NBJ5 622 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 MAP4K1Q92918 833 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 API5Q9BZZ5 524 aaKnown RBP12.02□□□□□ -0.49
HDAC8-215ENST00000444609 FOXQ1Q9C009 403 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 TUT1Q9H6E5 874 aaKnown RBP12.02□□□□□ -0.49
HDAC8-215ENST00000444609 ARHGEF3Q9NR81 526 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 SETD4Q9NVD3 440 aa12.02□□□□□ -0.49
HDAC8-215ENST00000444609 SRFP11831 508 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
HDAC8-215ENST00000444609 ADAM17P78536 824 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 ATP8B2P98198 1209 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 NONOQ15233 471 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDAC8-215ENST00000444609 CSRP2Q16527 193 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 FBXO47Q5MNV8 452 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 PRR23CQ6ZRP0 262 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 PRR23BQ6ZRT6 265 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 NEDD1Q8NHV4 660 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 GPR152Q8TDT2 470 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 SPATA33Q96N06 139 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 FTHL17Q9BXU8 183 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 AGO3Q9H9G7 860 aaKnown RBP12.01□□□□□ -0.49
HDAC8-215ENST00000444609 SEMA4GQ9NTN9 838 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 DZANK1Q9NVP4 752 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 ANKFY1Q9P2R3 1169 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 MRVI1Q9Y6F6 885 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 PLXNA4Q9HCM2 1894 aa12.01□□□□□ -0.49
HDAC8-215ENST00000444609 CNOT1A5YKK6 2376 aaKnown RBP12□□□□□ -0.49
HDAC8-215ENST00000444609 IGF2RP11717 2491 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 HELZ2Q9BYK8 2649 aaKnown RBP12□□□□□ -0.49
HDAC8-215ENST00000444609 GOLIM4O00461 696 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 PRDM1O75626 825 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 RETP07949 1114 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 STARD6P59095 220 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 CELF3Q5SZQ8 465 aaKnown RBP12□□□□□ -0.49
HDAC8-215ENST00000444609 LAIR1Q6GTX8 287 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 DCLRE1AQ6PJP8 1040 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 TSHZ1Q6ZSZ6 1077 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 CCDC149Q6ZUS6 474 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 TMC7Q7Z402 723 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 RGS22Q8NE09 1264 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 FEZF2Q8TBJ5 459 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 KIF12Q96FN5 646 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 IWS1Q96ST2 819 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 BCO2Q9BYV7 579 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 TYW1Q9NV66 732 aaKnown RBP12□□□□□ -0.49
HDAC8-215ENST00000444609 PNMA2Q9UL42 364 aa12□□□□□ -0.49
HDAC8-215ENST00000444609 C2orf71A6NGG8 1288 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 MINDY4BA8MYZ0 360 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 EIF3JO75822 258 aaKnown RBP11.99□□□□□ -0.49
HDAC8-215ENST00000444609 SCG2P13521 617 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 SLC16A2P36021 539 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 TTBK2Q6IQ55 1244 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 BTNL9Q6UXG8 535 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 TMC5Q6UXY8 1006 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 GPR149Q86SP6 731 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 NSUN6Q8TEA1 469 aaKnown RBP11.99□□□□□ -0.49
HDAC8-215ENST00000444609 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 ZNF287Q9HBT7 754 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 LRFN2Q9ULH4 789 aa11.99□□□□□ -0.49
HDAC8-215ENST00000444609 NOP58Q9Y2X3 529 aaKnown RBP11.99□□□□□ -0.49
HDAC8-215ENST00000444609 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
HDAC8-215ENST00000444609 BAZ2AQ9UIF9 1905 aaKnown RBP11.98□□□□□ -0.49
HDAC8-215ENST00000444609 KIAA1671Q9BY89 1806 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms