RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 IL17RAQ96F46 866 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 YME1L1Q96TA2 773 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 GPR20Q99678 358 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 NCOR1O75376 2440 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 PRRC2BQ5JSZ5 2229 aaKnown RBP6.87□□□□□ -1.31
PTPRR-204ENST00000440835 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 hCG_1984214I3L0E3 225 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 RFXAPO00287 272 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 TROAPQ12815 778 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 GPM6BQ13491 265 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 HSDL1Q3SXM5 330 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 GJD3Q8N144 294 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 NME8Q8N427 588 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 FIBCD1Q8N539 461 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 ZNF713Q8N859 430 aaPredicted RBP6.87□□□□□ -1.31
PTPRR-204ENST00000440835 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 RSPH1Q8WYR4 309 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 TSC1Q92574 1164 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 VAT1LQ9HCJ6 419 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 IFIT3O14879 490 aaKnown RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 PPP1R11O60927 126 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 ARHGEF15O94989 841 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 SLC26A2P50443 739 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 CSPP1Q1MSJ5 1256 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 PTCRAQ6ISU1 281 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 PDE12Q6L8Q7 609 aaKnown RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 PPP1R18Q6NYC8 613 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 SASS6Q6UVJ0 657 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 CMTR2Q8IYT2 770 aaKnown RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 STAG2Q8N3U4 1231 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 CTCFLQ8NI51 663 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 CHMP4CQ96CF2 233 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 TMEM87BQ96K49 555 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 SMARCAD1Q9H4L7 1026 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 CERS4Q9HA82 394 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 ERAP1Q9NZ08 941 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 SEC63Q9UGP8 760 aaKnown RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 KDM3AQ9Y4C1 1321 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 POTEB3A0JP26 581 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 MBLAC1A4D2B0 266 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 STAG3L1P0CL83 205 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 BMPR1AP36894 532 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 NUBP1P53384 320 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 UBE3AQ05086 875 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 POTEBQ6S5H4 581 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 ADHFE1Q8IWW8 467 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 SMARCC2Q8TAQ2 1214 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 SEPT1Q8WYJ6 367 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 IRF2BPLQ9H1B7 796 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 RNPEPQ9H4A4 650 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 NFASCO94856 1347 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 ADGRA3Q8IWK6 1321 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 DCXO43602 365 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 LIFRP42702 1097 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 CHMP4BP1P59074 171 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 MRPS9P82933 396 aaKnown RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 SP2Q02086 613 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 SMAD4Q13485 552 aaKnown RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 CTC1Q2NKJ3 1217 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 IER5Q5VY09 327 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 TSHZ1Q6ZSZ6 1077 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 MYOCDQ8IZQ8 938 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 PIGSQ96S52 555 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 IFIH1Q9BYX4 1025 aaKnown RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 EPHX3Q9H6B9 360 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 RC3H2Q9HBD1 1191 aaKnown RBP6.86□□□□□ -1.31
PTPRR-204ENST00000440835 COL1A2P08123 1366 aa6.86□□□□□ -1.31
PTPRR-204ENST00000440835 REC8O95072 547 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 FOSP01100 380 aaPredicted RBP6.85□□□□□ -1.31
PTPRR-204ENST00000440835 MMP1P03956 469 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 MGAT3Q09327 533 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 HS1BP3Q53T59 392 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPRR-204ENST00000440835 CYB5R4Q7L1T6 521 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 NIPA1Q7RTP0 329 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 PLPPR4Q7Z2D5 763 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 BMP8AQ7Z5Y6 402 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 POTEDQ86YR6 584 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 NPAS4Q8IUM7 802 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 ZNF689Q96CS4 500 aaPredicted RBP6.85□□□□□ -1.31
PTPRR-204ENST00000440835 MFSD14AQ96MC6 490 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 CDCA3Q99618 268 aaPredicted RBP6.85□□□□□ -1.31
PTPRR-204ENST00000440835 CPVLQ9H3G5 476 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 TTC3P53804 2025 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 CHD9Q3L8U1 2897 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.85□□□□□ -1.31
PTPRR-204ENST00000440835 M0QZ92 97 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 TREHO43280 583 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 RCAN1P53805 252 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 SMAD2Q15796 467 aaKnown RBP6.85□□□□□ -1.31
PTPRR-204ENST00000440835 TCTN1Q2MV58 587 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 IL31RAQ8NI17 732 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 IGDCC4Q8TDY8 1250 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 LMBR1Q8WVP7 490 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 WNT8BQ93098 351 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 NECAB3Q96P71 396 aaPredicted RBP6.85□□□□□ -1.31
PTPRR-204ENST00000440835 C17orf80Q9BSJ5 609 aa6.85□□□□□ -1.31
PTPRR-204ENST00000440835 UBIAD1Q9Y5Z9 338 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms