RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
MCF2L-216ENST00000439475 DHX38Q92620 1227 aaKnown RBP11.85□□□□□ -0.51
MCF2L-216ENST00000439475 CTAGE1Q96RT6 745 aa11.85□□□□□ -0.51
MCF2L-216ENST00000439475 RIT2Q99578 217 aa11.85□□□□□ -0.51
MCF2L-216ENST00000439475 TEKT3Q9BXF9 490 aa11.85□□□□□ -0.51
MCF2L-216ENST00000439475 ZNF302Q9NR11 478 aa11.85□□□□□ -0.51
MCF2L-216ENST00000439475 MSRAQ9UJ68 235 aa11.85□□□□□ -0.51
MCF2L-216ENST00000439475 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
MCF2L-216ENST00000439475 TELO2Q9Y4R8 837 aa11.85□□□□□ -0.51
MCF2L-216ENST00000439475 PCDHA10Q9Y5I2 948 aa11.85□□□□□ -0.51
MCF2L-216ENST00000439475 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 IGKV6D-21A0A0A0MT36 114 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 POTEB3A0JP26 581 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 KIF28PB7ZC32 967 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 ADAMTS3O15072 1205 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 DHX15O43143 795 aaKnown RBP11.84□□□□□ -0.51
MCF2L-216ENST00000439475 GAS7O60861 476 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 BAIAP3O94812 1187 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 LARGE1O95461 756 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 FDPSP14324 419 aaKnown RBP11.84□□□□□ -0.51
MCF2L-216ENST00000439475 GCFC2P16383 781 aaKnown RBP11.84□□□□□ -0.51
MCF2L-216ENST00000439475 CYP3A7P24462 503 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 SFNP31947 248 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 ADAM17P78536 824 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
MCF2L-216ENST00000439475 RAB30Q15771 203 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 GRIK4Q16099 956 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 INF2Q27J81 1249 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 LETM2Q2VYF4 491 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 LRCH2Q5VUJ6 765 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 SWSAP1Q6NVH7 229 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 PDXDC2PQ6P474 469 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 CNKSR3Q6P9H4 555 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 POTEBQ6S5H4 581 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 NEK8Q86SG6 692 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 PHOSPHO2Q8TCD6 241 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 LMBR1Q8WVP7 490 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 DDX25Q9UHL0 483 aaKnown RBP11.84□□□□□ -0.51
MCF2L-216ENST00000439475 TUBE1Q9UJT0 475 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 CEP131Q9UPN4 1083 aa11.84□□□□□ -0.51
MCF2L-216ENST00000439475 ABHD14A-ACY1A0A1B0GW23 586 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 M0QZ92 97 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 MSH4O15457 936 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 BAG4O95429 457 aaKnown RBP11.83□□□□□ -0.52
MCF2L-216ENST00000439475 CXCL10P02778 98 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 INSRRP14616 1297 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 KCNJ6P48051 423 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 MCM2P49736 904 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 JAK3P52333 1124 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 IGBP1P78318 339 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 IKBKEQ14164 716 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 HIC1Q14526 733 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 PLCB4Q15147 1175 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 NPY5RQ15761 445 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 TRIM71Q2Q1W2 868 aaKnown RBP11.83□□□□□ -0.52
MCF2L-216ENST00000439475 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 PIK3AP1Q6ZUJ8 805 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 RPAINQ86UA6 219 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 RDM1Q8NG50 284 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 SLC9A7Q96T83 725 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 PCYT2Q99447 389 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 DISC1Q9NRI5 854 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 NRBP2Q9NSY0 501 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 KIF3AQ9Y496 699 aa11.83□□□□□ -0.52
MCF2L-216ENST00000439475 MYH9P35579 1960 aaKnown RBP11.83□□□□□ -0.52
MCF2L-216ENST00000439475 SCN5AQ14524 2016 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 CCNT1O60563 726 aaKnown RBP11.82□□□□□ -0.52
MCF2L-216ENST00000439475 JAK2O60674 1132 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 DKC1O60832 514 aaKnown RBP eCLIP11.82□□□□□ -0.52
MCF2L-216ENST00000439475 TDP2O95551 362 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 CCNE2O96020 404 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 MMP1P03956 469 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 ATP2A2P16615 1042 aaKnown RBP11.82□□□□□ -0.52
MCF2L-216ENST00000439475 IER5Q5VY09 327 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 KRT40Q6A162 431 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 MIER3Q7Z3K6 550 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 NME8Q8N427 588 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 ATP8B4Q8TF62 1192 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-216ENST00000439475 SEPT8Q92599 483 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 SLC5A5Q92911 643 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 TIFAQ96CG3 184 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 C8orf76Q96K31 380 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 FAM20AQ96MK3 541 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 MBOAT7Q96N66 472 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 UIMC1Q96RL1 719 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 KIF2CQ99661 725 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 SEMA6BQ9H3T3 888 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 MTMR10Q9NXD2 777 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 CXXC1Q9P0U4 656 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-216ENST00000439475 GABBR1Q9UBS5 961 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
MCF2L-216ENST00000439475 MAFBQ9Y5Q3 323 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-216ENST00000439475 COL1A2P08123 1366 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 MBLAC1A4D2B0 266 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-216ENST00000439475 TBX3O15119 743 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms