RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 ISM2Q6H9L7 571 aa13.82□□□□□ -0.2
HLA-DOB-206ENST00000438763 SEPT14Q6ZU15 432 aa13.82□□□□□ -0.2
HLA-DOB-206ENST00000438763 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
HLA-DOB-206ENST00000438763 RNF214Q8ND24 703 aa13.82□□□□□ -0.2
HLA-DOB-206ENST00000438763 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOB-206ENST00000438763 BPIFA3Q9BQP9 254 aa13.82□□□□□ -0.2
HLA-DOB-206ENST00000438763 CFHR5Q9BXR6 569 aa13.82□□□□□ -0.2
HLA-DOB-206ENST00000438763 A0A087WWV3 80 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 CYP4A11Q02928 519 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 CRHR2Q13324 411 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 CTTNQ14247 550 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 DHX8Q14562 1220 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 DPCR1Q3MIW9 517 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 CT47A1Q5JQC4 288 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 DPP9Q86TI2 863 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 TPH2Q8IWU9 490 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 SMAP1Q8IYB5 467 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 SYT2Q8N9I0 419 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 NACC1Q96RE7 527 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 GTPBP4Q9BZE4 634 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 CBX8Q9HC52 389 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 SLC5A4Q9NY91 659 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 SLC9A2Q9UBY0 812 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 DACH1Q9UI36 760 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 SAMM50Q9Y512 469 aa13.81□□□□□ -0.2
HLA-DOB-206ENST00000438763 COL6A3P12111 3177 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 PVALEFA0A1B0GWK0 134 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 MYMKA6NI61 221 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 KLRC4O43908 158 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 LYPLA2O95372 231 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 EYA4O95677 639 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 CCNE2O96020 404 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 XRCC6P12956 609 aaKnown RBP eCLIP13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 BMP6P22004 513 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 QARSP47897 775 aaKnown RBP13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 SLC12A3P55017 1021 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 PSMC6P62333 389 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 SP2Q02086 613 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 NEDD9Q14511 834 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 MORN1Q5T089 497 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 MAMDC4Q6UXC1 1216 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 C11orf57Q6ZUT1 292 aaPredicted RBP13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 CD99L2Q8TCZ2 262 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 ZSWIM4Q9H7M6 989 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 JPH1Q9HDC5 661 aaPredicted RBP13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 PCDHA10Q9Y5I2 948 aa13.8□□□□□ -0.2
HLA-DOB-206ENST00000438763 ZNFX1Q9P2E3 1918 aaKnown RBP13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 DKC1O60832 514 aaKnown RBP eCLIP13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 RHOBTB3O94955 611 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 ASIC1P78348 528 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 IQCB1Q15051 598 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 KMT5BQ4FZB7 885 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 ZNF658Q5TYW1 1059 aaPredicted RBP13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 UNC13DQ70J99 1090 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 ARMCX2Q7L311 632 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 C4orf19Q8IY42 314 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 MSL3Q8N5Y2 521 aaKnown RBP13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 DDX12PQ92771 950 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 ARMC5Q96C12 935 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 LXNQ9BS40 222 aa13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 DDX41Q9UJV9 622 aaKnown RBP13.79□□□□□ -0.2
HLA-DOB-206ENST00000438763 ATG7O95352 703 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 SSBP05455 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 PSAPP07602 524 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 HOXC6P09630 235 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 CYP11B2P19099 503 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 ACTR2P61160 394 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 PSMC5P62195 406 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 CAP1Q01518 475 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 CCDC62Q6P9F0 684 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 ABHD15Q6UXT9 468 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 EEPD1Q7L9B9 569 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 GPBP1Q86WP2 473 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 DNAJC19Q96DA6 116 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 MAML3Q96JK9 1138 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 BCAS3Q9H6U6 928 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 VTA1Q9NP79 307 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 WRAP73Q9P2S5 460 aaPredicted RBP13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 PLXNB2O15031 1838 aa13.78□□□□□ -0.2
HLA-DOB-206ENST00000438763 RBM47A0AV96 593 aaKnown RBP13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 SMTNL1A8MU46 457 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 BECN2A8MW95 431 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 PSMD2Q13200 908 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 ARSHQ5FYA8 562 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 MIS18BP1Q6P0N0 1132 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 DYMQ7RTS9 669 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 LUZP1Q86V48 1076 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 NPLOC4Q8TAT6 608 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 PIGOQ8TEQ8 1089 aa13.77□□□□□ -0.21
HLA-DOB-206ENST00000438763 SCFD2Q8WU76 684 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms