RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.23□□□□□ -0.45
ERGIC3-207ENST00000438317 CEP63Q96MT8 703 aa12.23□□□□□ -0.45
ERGIC3-207ENST00000438317 NUDT12Q9BQG2 462 aa12.23□□□□□ -0.45
ERGIC3-207ENST00000438317 HAUS4Q9H6D7 363 aa12.23□□□□□ -0.45
ERGIC3-207ENST00000438317 PRR12Q9ULL5 1215 aa12.23□□□□□ -0.45
ERGIC3-207ENST00000438317 KIAA1024Q9UPX6 916 aa12.23□□□□□ -0.45
ERGIC3-207ENST00000438317 DNM3Q9UQ16 869 aa12.23□□□□□ -0.45
ERGIC3-207ENST00000438317 MRPL11Q9Y3B7 192 aaKnown RBP12.23□□□□□ -0.45
ERGIC3-207ENST00000438317 LAMA3Q16787 3333 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 TCP10L2B9ZVM9 353 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 GNRH1P01148 92 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 MUTP22033 750 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 RPA1P27694 616 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 ZNF76P36508 570 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 STAT2P52630 851 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 PRMT2P55345 433 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 MAP3K10Q02779 954 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 MTF1Q14872 753 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 MEA1Q16626 185 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 VWA3BQ502W6 1294 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 FAM26FQ5R3K3 315 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 ETNPPLQ8TBG4 499 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 DESI2Q9BSY9 194 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 POLR3CQ9BUI4 534 aaPredicted RBP12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 MRPL44Q9H9J2 332 aaKnown RBP12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 RABGAP1Q9Y3P9 1069 aa12.22□□□□□ -0.45
ERGIC3-207ENST00000438317 A0A1W2PRG0 241 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 B4DLN1 442 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 BTBD19C9JJ37 291 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 RNF225M0QZC1 329 aaPredicted RBP12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 NDUFA10O95299 355 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 SLURP2P0DP57 97 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 TRIM21P19474 475 aaKnown RBP12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 HNRNPH3P31942 346 aaKnown RBP12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 GJA8P48165 433 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 ERVK-24P63145 666 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 COASYQ13057 564 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 MIIPQ5JXC2 388 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 C17orf99Q6UX52 265 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 KCNK18Q7Z418 384 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 SAMD3Q8N6K7 520 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 CEP112Q8N8E3 955 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 PCMTD1Q96MG8 357 aaPredicted RBP12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 WDR24Q96S15 920 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 NUCKS1Q9H1E3 243 aaKnown RBP12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 NDST4Q9H3R1 872 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 LZTFL1Q9NQ48 299 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 OGFRQ9NZT2 677 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 FEM1BQ9UK73 627 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 ZBTB21Q9ULJ3 1066 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 MRFAP1Q9Y605 127 aa12.21□□□□□ -0.45
ERGIC3-207ENST00000438317 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.46
ERGIC3-207ENST00000438317 LOXHD1Q8IVV2 1947 aa12.21□□□□□ -0.46
ERGIC3-207ENST00000438317 ATAD5Q96QE3 1844 aa12.21□□□□□ -0.46
ERGIC3-207ENST00000438317 CTAGE9A4FU28 777 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 SPDYE5A6NIY4 337 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 GCOM1H8Y6P7 765 aaPredicted RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 TADA3O75528 432 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 IPO7O95373 1038 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 SSBP05455 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 KRT18P05783 430 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 POLR2MP0CAP2 368 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 JAG1P78504 1218 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 TNFAIP1Q13829 316 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 RRP1BQ14684 758 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 NAA30Q147X3 362 aaPredicted RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 KIF22Q14807 665 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 ECM1Q16610 540 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 PRR16Q569H4 304 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 ZNF569Q5MCW4 686 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 GPBP1Q86WP2 473 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 TXLNBQ8N3L3 684 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 GPR161Q8N6U8 529 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 SYT2Q8N9I0 419 aaPredicted RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 EHBP1Q8NDI1 1231 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 LRCH3Q96II8 777 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 CARD6Q9BX69 1037 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 TTYH3Q9C0H2 523 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 TMEM39BQ9GZU3 492 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 ZCCHC17Q9NP64 241 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 CDC23Q9UJX2 597 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 PNMA2Q9UL42 364 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 FAM184BQ9ULE4 1060 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 SNCAIPQ9Y6H5 919 aa12.2□□□□□ -0.46
ERGIC3-207ENST00000438317 FRMD3A2A2Y4 597 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 E9PMD0 336 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 POTEB2H3BUK9 544 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 ATP8B1O43520 1251 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 ECM2O94769 699 aaPredicted RBP12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 GJB1P08034 283 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 ASNSP08243 561 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 CETPP11597 493 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 CYP11B2P19099 503 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms