RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RSPH10BP0C881 870 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 SPATA31C1P0DKV0 1188 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 KLRC1P26715 233 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 AARSP49588 968 aaKnown RBP eCLIP11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 NAP1L1P55209 391 aaKnown RBP11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 CYP4A11Q02928 519 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 CERKLQ49MI3 558 aaPredicted RBP11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 MCTP2Q6DN12 878 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 CCDC65Q8IXS2 484 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 DHX36Q9H2U1 1008 aaKnown RBP11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 RBM12Q9NTZ6 932 aaKnown RBP11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 ADAMTS1Q9UHI8 967 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 QSER1Q2KHR3 1735 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 KDM3AQ9Y4C1 1321 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 SSU72P8A0A1W2PR75 194 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 FTCDO95954 541 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 KRT18P05783 430 aaKnown RBP11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 HOXA13P31271 388 aaPredicted RBP11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 RBM5P52756 815 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■■■■■ 30
CLSTN1-203ENST00000435891 RAPGEF1Q13905 1077 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 SFMBT2Q5VUG0 894 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 MMGT1Q8N4V1 131 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 AENQ8WTP8 325 aaKnown RBP11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 VIPAS39Q9H9C1 493 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 HYOU1Q9Y4L1 999 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 FRMD3A2A2Y4 597 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 G3V3G9 751 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 KCNA1Q09470 495 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 KCNH2Q12809 1159 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 SLC9C1Q4G0N8 1177 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 HAUS3Q68CZ6 603 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 RPAINQ86UA6 219 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 CYP3A7-CYP3A51PA0A087WV96 503 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 ZSCAN5CA6NGD5 496 aaPredicted RBP11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 F5H6K3 240 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 RBAK-RBAKDNI3L0D1 243 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 OPLAHO14841 1288 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 SLC9A1P19634 815 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 CYP3A7P24462 503 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 NR2F2P24468 414 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 USP11P51784 963 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 KLRC3Q07444 240 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 GIT2Q14161 759 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 RRP1BQ14684 758 aaKnown RBP11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 ZNF572Q7Z3I7 529 aaPredicted RBP11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 SFR1Q86XK3 245 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 CEP63Q96MT8 703 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 MBOAT7Q96N66 472 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 ALS2CR12Q96Q35 445 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 REEP2Q9BRK0 252 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 EHD4Q9H223 541 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 GOLPH3Q9H4A6 298 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 MED4Q9NPJ6 270 aa11.45□□□□□ -0.58
CLSTN1-203ENST00000435891 PALMO75781 387 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 MYBP10242 640 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 PRLRP16471 622 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 LIG3P49916 1009 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 RNASE9P60153 205 aaKnown RBP11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 MAP9Q49MG5 647 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 DPY19L2P1Q6NXN4 242 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 FOXR2Q6PJQ5 311 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 SND1Q7KZF4 910 aaKnown RBP eCLIP11.44□□□□□ -0.582e-7■■■□□ 15.6
CLSTN1-203ENST00000435891 MKL1Q969V6 931 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 GANQ9H2C0 597 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 RABEP2Q9H5N1 569 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 NRXN2Q9P2S2 1712 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 SERPING1P05155 500 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 MARSP56192 900 aaKnown RBP11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 ICA1Q05084 483 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 LRCH2Q5VUJ6 765 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 SPICE1Q8N0Z3 855 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 CCDC17Q96LX7 622 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 ZDHHC15Q96MV8 337 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 NOX5Q96PH1 765 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 C10orf71Q711Q0 1435 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 SCN9AQ15858 1988 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 SFI1A8K8P3 1242 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 NDUFB10O96000 172 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 TCP1P17987 556 aaKnown RBP11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 PTPROQ16827 1216 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 SLC27A3Q5K4L6 730 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 COL23A1Q86Y22 540 aaPredicted RBP11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 EDEM3Q9BZQ6 932 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 RGL1Q9NZL6 768 aa11.44□□□□□ -0.58
CLSTN1-203ENST00000435891 SPATA31A6Q5VVP1 1343 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 NPR1P16066 1061 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 MCM3P25205 808 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 CASP4P49662 377 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 CCDC181Q5TID7 509 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 TSEN2Q8NCE0 465 aaKnown RBP11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 NYAP2Q9P242 653 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 AJAP1Q9UKB5 411 aaPredicted RBP11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 FAM184BQ9ULE4 1060 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 ESYT3A0FGR9 886 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 EML1O00423 815 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 ZBTB39O15060 712 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms