RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 PCDHA7Q9UN72 937 aa11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 CLIC4Q9Y696 253 aa11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 COL15A1P39059 1388 aa11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 GADD45BO75293 160 aaPredicted RBP11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 IFNA8P32881 189 aa11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 NDUFA8P51970 172 aa11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 RASSF7Q02833 373 aa11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 CCDC38Q502W7 563 aa11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 PDZD8Q8NEN9 1154 aa11.48□□□□□ -0.57
LDLRAD4-204ENST00000435606 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SCARA5Q6ZMJ2 495 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SCN4BQ8IWT1 228 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 RASGRP4Q8TDF6 673 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 MTRQ99707 1265 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 DDX50Q9BQ39 737 aaKnown RBP11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SLC7A5P2Q9GIP4 190 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 ASB14A6NK59 587 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 DRP2Q13474 957 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 BRD3Q15059 726 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 FRA10AC1Q70Z53 315 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 DYRK4Q9NR20 520 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 ZNF212Q9UDV6 495 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 EPN1Q9Y6I3 576 aaPredicted RBP11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SCINQ9Y6U3 715 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SAMD9LQ8IVG5 1584 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 MAP3K4Q9Y6R4 1608 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 MMP1P03956 469 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 MSH2P43246 934 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SLC10A5Q5PT55 438 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 ZNF302Q9NR11 478 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SEC24BO95487 1268 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 FBXW4P57775 412 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 DYNLL2Q96FJ2 89 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 ITM2BQ9Y287 266 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 A0A1W2PQ27 194 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 A0A1W2PQ64 194 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 A0A1W2PQD8 194 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SFNP31947 248 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 KRT76Q01546 638 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 UBE2SQ16763 222 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 BRIP1Q9BX63 1249 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 GCOM2Q9BZD3 368 aaPredicted RBP11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 TRPV6Q9H1D0 765 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 GNGT2O14610 69 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 IL9RQ01113 521 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 ERICH1Q86X53 443 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 TTC39CQ8N584 583 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 AFG1LQ8WV93 481 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 IFT43Q96FT9 208 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 ERVK-7P63135 1459 aa11.47□□□□□ -0.57
LDLRAD4-204ENST00000435606 SPATA31A3Q5VYP0 1347 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 A0A1B0GUA9 196 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 POC1B-GALNT4F8VUJ3 575 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 HSPA6P17066 643 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 ZNF445P59923 1031 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 SLC12A1Q13621 1099 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 SLC39A14Q15043 492 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 BRINP3Q76B58 766 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 ADGRL3Q9HAR2 1447 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 MAP4K1Q92918 833 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 TTC37Q6PGP7 1564 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 RGS12O14924 1447 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 SH2B2O14492 632 aaPredicted RBP11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 CC2D1AQ6P1N0 951 aaPredicted RBP11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 EFHBQ8N7U6 833 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 DEPDC1BQ8WUY9 529 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 ABCF3Q9NUQ8 709 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 EHHADHQ08426 723 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 PTPROQ16827 1216 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 ZNF568Q3ZCX4 644 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 STAP2Q9UGK3 403 aa11.46□□□□□ -0.57
LDLRAD4-204ENST00000435606 ZBTB5O15062 677 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 TMCC1O94876 653 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 PRELPP51888 382 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 PEX3P56589 373 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 DYNLT1P63172 113 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 TOGARAM2Q6ZUX3 1019 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 SH3RF3Q8TEJ3 882 aaPredicted RBP11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 ACAP3Q96P50 834 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 PLEKHA4Q9H4M7 779 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 FANCLQ9NW38 375 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 RNF217Q8TC41 542 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 POLR3EQ9NVU0 708 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 STRIP2Q9ULQ0 834 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 MOCS3O95396 460 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 ECEL1O95672 775 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 ZBED1O96006 694 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 PAPOLAP51003 745 aaKnown RBP11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 GPC3P51654 580 aa11.46□□□□□ -0.58
LDLRAD4-204ENST00000435606 BASP1P80723 227 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms