RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 H0Y858 1186 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 NKRFO15226 690 aaKnown RBP eCLIP5.9□□□□□ -1.46
LINC00353-201ENST00000435401 SLPIP03973 132 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 CSF2RBP32927 897 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 EPHA5P54756 1037 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 BMS1Q14692 1282 aaKnown RBP5.9□□□□□ -1.46
LINC00353-201ENST00000435401 STYK1Q6J9G0 422 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 NSMFQ6X4W1 530 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 ZFPM1Q8IX07 1006 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.9□□□□□ -1.46
LINC00353-201ENST00000435401 OSBPL2Q9H1P3 480 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 TELO2Q9Y4R8 837 aa5.9□□□□□ -1.46
LINC00353-201ENST00000435401 FAM221BA6H8Z2 402 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 CCDC85CA6NKD9 419 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 SOD2P04179 222 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 PABPC1P11940 636 aaKnown RBP5.89□□□□□ -1.47
LINC00353-201ENST00000435401 NTRK3Q16288 839 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 SPDYAQ5MJ70 313 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 TCTN3Q6NUS6 607 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 GIMAP6Q6P9H5 292 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 OSBP2Q969R2 916 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 GNRHR2Q96P88 292 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 TRIM55Q9BYV6 548 aa5.89□□□□□ -1.47
LINC00353-201ENST00000435401 IL18BPO95998 194 aa5.88□□□□□ -1.47
LINC00353-201ENST00000435401 USP10Q14694 798 aaKnown RBP5.88□□□□□ -1.47
LINC00353-201ENST00000435401 PRKD1Q15139 912 aaPredicted RBP5.88□□□□□ -1.47
LINC00353-201ENST00000435401 DPP8Q6V1X1 898 aaPredicted RBP5.88□□□□□ -1.47
LINC00353-201ENST00000435401 KCTD1Q719H9 257 aa5.88□□□□□ -1.47
LINC00353-201ENST00000435401 GIMAP8Q8ND71 665 aaPredicted RBP5.88□□□□□ -1.47
LINC00353-201ENST00000435401 ST13P5Q8NFI4 369 aaPredicted RBP5.88□□□□□ -1.47
LINC00353-201ENST00000435401 CARD11Q9BXL7 1154 aa5.88□□□□□ -1.47
LINC00353-201ENST00000435401 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
LINC00353-201ENST00000435401 ZFR2Q9UPR6 939 aaKnown RBP5.88□□□□□ -1.47
LINC00353-201ENST00000435401 TRAV20A0A0B4J274 112 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 ACOT7O00154 380 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 FOXS1O43638 330 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 CUTAO60888 179 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 POLD1P28340 1107 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 IFRD2Q12894 506 aaPredicted RBP5.87□□□□□ -1.47
LINC00353-201ENST00000435401 ZNF568Q3ZCX4 644 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 SOGA3Q5TF21 947 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 GPR155Q7Z3F1 870 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 TAX1BP1Q86VP1 789 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 LRRC47Q8N1G4 583 aaKnown RBP5.87□□□□□ -1.47
LINC00353-201ENST00000435401 NEIL1Q96FI4 390 aaPredicted RBP5.87□□□□□ -1.47
LINC00353-201ENST00000435401 LRRC37BQ96QE4 947 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 TACO1Q9BSH4 297 aaKnown RBP5.87□□□□□ -1.47
LINC00353-201ENST00000435401 ALG1Q9BT22 464 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 IPPKQ9H8X2 491 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 SIRPGQ9P1W8 387 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 CDK11AQ9UQ88 783 aaPredicted RBP5.87□□□□□ -1.47
LINC00353-201ENST00000435401 HS3ST3A1Q9Y663 406 aa5.87□□□□□ -1.47
LINC00353-201ENST00000435401 SHROOM4Q9ULL8 1493 aa5.86□□□□□ -1.47
LINC00353-201ENST00000435401 NBPF6Q5VWK0 638 aa5.86□□□□□ -1.47
LINC00353-201ENST00000435401 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
LINC00353-201ENST00000435401 NLGN4XQ8N0W4 816 aa5.86□□□□□ -1.47
LINC00353-201ENST00000435401 NBPF4Q96M43 638 aa5.86□□□□□ -1.47
LINC00353-201ENST00000435401 PCED1AQ9H1Q7 454 aa5.86□□□□□ -1.47
LINC00353-201ENST00000435401 SNTG2Q9NY99 539 aa5.86□□□□□ -1.47
LINC00353-201ENST00000435401 BLACEA4D250 179 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 U2SURPO15042 1029 aaKnown RBP5.85□□□□□ -1.47
LINC00353-201ENST00000435401 RAC3P60763 192 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 DBPQ10586 325 aaPredicted RBP5.85□□□□□ -1.47
LINC00353-201ENST00000435401 RASA3Q14644 834 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 BTBD8Q5XKL5 378 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 EDAQ92838 391 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 ZNF669Q96BR6 464 aaPredicted RBP5.85□□□□□ -1.47
LINC00353-201ENST00000435401 SRPK1Q96SB4 655 aaKnown RBP5.85□□□□□ -1.47
LINC00353-201ENST00000435401 ADOQ96SZ5 270 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 MENTQ9BUN1 341 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 ZNF341Q9BYN7 854 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 SLITRK6Q9H5Y7 841 aa5.85□□□□□ -1.47
LINC00353-201ENST00000435401 ZNF888P0CJ79 500 aaPredicted RBP5.84□□□□□ -1.47
LINC00353-201ENST00000435401 FOXE3Q13461 319 aa5.84□□□□□ -1.47
LINC00353-201ENST00000435401 TOP3AQ13472 1001 aaPredicted RBP5.84□□□□□ -1.47
LINC00353-201ENST00000435401 DEPDC7Q96QD5 511 aa5.84□□□□□ -1.47
LINC00353-201ENST00000435401 CD244Q9BZW8 370 aa5.84□□□□□ -1.47
LINC00353-201ENST00000435401 SLC39A2Q9NP94 309 aa5.84□□□□□ -1.47
LINC00353-201ENST00000435401 PTPN22Q9Y2R2 807 aa5.84□□□□□ -1.47
LINC00353-201ENST00000435401 MSRB2Q9Y3D2 182 aa5.84□□□□□ -1.47
LINC00353-201ENST00000435401 ASXL2Q76L83 1435 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 ESYT3A0FGR9 886 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 AQP7O14520 342 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 COMTP21964 271 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 PAK1Q13153 545 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 GPR19Q15760 415 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 ZMAT1Q5H9K5 638 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 AGBL4Q5VU57 503 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 SH3RF2Q8TEC5 729 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 SCYL1Q96KG9 808 aa5.83□□□□□ -1.48
LINC00353-201ENST00000435401 TCRBV5S4A2TA0A5A2 114 aa5.82□□□□□ -1.48
LINC00353-201ENST00000435401 PDPK1O15530 556 aa5.82□□□□□ -1.48
LINC00353-201ENST00000435401 PTPN1P18031 435 aaKnown RBP5.82□□□□□ -1.48
LINC00353-201ENST00000435401 CR2P20023 1033 aa5.82□□□□□ -1.48
LINC00353-201ENST00000435401 NRN1LQ496H8 165 aa5.82□□□□□ -1.48
LINC00353-201ENST00000435401 MIIPQ5JXC2 388 aa5.82□□□□□ -1.48
LINC00353-201ENST00000435401 YOD1Q5VVQ6 348 aaPredicted RBP5.82□□□□□ -1.48
LINC00353-201ENST00000435401 ARHGAP36Q6ZRI8 547 aa5.82□□□□□ -1.48
LINC00353-201ENST00000435401 CXXC5Q7LFL8 322 aaKnown RBP5.82□□□□□ -1.48
LINC00353-201ENST00000435401 JAZF1Q86VZ6 243 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms