RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 IGBP1P78318 339 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 NBR1Q14596 966 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 GDF6Q6KF10 455 aaPredicted RBP17.49■□□□□ 0.39
TREX1-201ENST00000433541 ABHD15Q6UXT9 468 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 SH3RF1Q7Z6J0 888 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 CCDC60Q8IWA6 550 aaPredicted RBP17.49■□□□□ 0.39
TREX1-201ENST00000433541 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 GABBR1Q9UBS5 961 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 GTF2IRD1Q9UHL9 959 aa17.49■□□□□ 0.39
TREX1-201ENST00000433541 WNT7AO00755 349 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 LGR5O75473 907 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 CYP2C9P11712 490 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 MDM2Q00987 491 aaPredicted RBP17.48■□□□□ 0.39
TREX1-201ENST00000433541 PPFIA1Q13136 1202 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 RILPL1Q5EBL4 403 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 CCDC155Q8N6L0 562 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 ATP6V0A1Q93050 837 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 HIPK3Q9H422 1215 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 RNPEPQ9H4A4 650 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 SETD4Q9NVD3 440 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 PCDH10Q9P2E7 1040 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 PCDHA12Q9UN75 941 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 LTBP2Q14767 1821 aa17.48■□□□□ 0.39
TREX1-201ENST00000433541 MYH15Q9Y2K3 1946 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 POTEB3A0JP26 581 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 STX6O43752 255 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 ATG7O95352 703 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 CD4P01730 458 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 OR52Z1P0C646 297 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 SLC26A2P50443 739 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 ORC2Q13416 577 aaPredicted RBP17.47■□□□□ 0.39
TREX1-201ENST00000433541 TMEM266Q2M3C6 531 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 PRPF38BQ5VTL8 546 aaKnown RBP17.47■□□□□ 0.39
TREX1-201ENST00000433541 POTEBQ6S5H4 581 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 PLPPR4Q7Z2D5 763 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 BRAPQ7Z569 592 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 HAS1Q92839 578 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 PCYT2Q99447 389 aa17.47■□□□□ 0.39
TREX1-201ENST00000433541 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
TREX1-201ENST00000433541 TRIM43BA6NCK2 446 aa17.46■□□□□ 0.39
TREX1-201ENST00000433541 ZNF200P98182 395 aaPredicted RBP17.46■□□□□ 0.39
TREX1-201ENST00000433541 BFSP2Q13515 415 aa17.46■□□□□ 0.39
TREX1-201ENST00000433541 GRIK4Q16099 956 aa17.46■□□□□ 0.39
TREX1-201ENST00000433541 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
TREX1-201ENST00000433541 SESTD1Q86VW0 696 aa17.46■□□□□ 0.39
TREX1-201ENST00000433541 RETREG2Q8NC44 543 aa17.46■□□□□ 0.39
TREX1-201ENST00000433541 RDM1Q8NG50 284 aa17.46■□□□□ 0.39
TREX1-201ENST00000433541 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
TREX1-201ENST00000433541 TRIM43Q96BQ3 446 aaPredicted RBP17.46■□□□□ 0.39
TREX1-201ENST00000433541 PCDHB6Q9Y5E3 794 aa17.46■□□□□ 0.39
TREX1-201ENST00000433541 EVPLQ92817 2033 aa17.46■□□□□ 0.39
TREX1-201ENST00000433541 NRCAMQ92823 1304 aa17.46■□□□□ 0.38
TREX1-201ENST00000433541 KIAA0355O15063 1070 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 PPP2R5CQ13362 524 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 PLCB4Q15147 1175 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 BANK1Q8NDB2 785 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 AFAP1L1Q8TED9 768 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 LMBR1Q8WVP7 490 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 BADQ92934 168 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 FAM167AQ96KS9 214 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 TMEM60Q9H2L4 133 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 DAXXQ9UER7 740 aaPredicted RBP17.45■□□□□ 0.38
TREX1-201ENST00000433541 TUBE1Q9UJT0 475 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 VAV3Q9UKW4 847 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 TBX21Q9UL17 535 aa17.45■□□□□ 0.38
TREX1-201ENST00000433541 TANC1Q9C0D5 1861 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 IGKV6D-21A0A0A0MT36 114 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 TREHO43280 583 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 HBP1O60381 514 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 TIMP1P01033 207 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 INSRRP14616 1297 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 CYP2C18P33260 490 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 TECP42680 631 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 MAGEA10P43363 369 aaPredicted RBP17.44■□□□□ 0.38
TREX1-201ENST00000433541 TOB1P50616 345 aaPredicted RBP17.44■□□□□ 0.38
TREX1-201ENST00000433541 CCL23P55773 120 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 PRKCEQ02156 737 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 PTGDRQ13258 359 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 TMEM199Q8N511 208 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 SEPT9Q9UHD8 586 aaPredicted RBP17.44■□□□□ 0.38
TREX1-201ENST00000433541 IGSF9BQ9UPX0 1349 aa17.44■□□□□ 0.38
TREX1-201ENST00000433541 POTEMA6NI47 508 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 RRN3P2A6NIE6 340 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 EML1O00423 815 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 DKC1O60832 514 aaKnown RBP eCLIP17.43■□□□□ 0.38
TREX1-201ENST00000433541 CYP4A11Q02928 519 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 FPGSQ05932 587 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 PTK7Q13308 1070 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 UGCGQ16739 394 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 ATP8B4Q8TF62 1192 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 TRAPPC12Q8WVT3 735 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 BBXQ8WY36 941 aaPredicted RBP17.43■□□□□ 0.38
TREX1-201ENST00000433541 CCDC43Q96MW1 224 aaKnown RBP17.43■□□□□ 0.38
TREX1-201ENST00000433541 NOC4LQ9BVI4 516 aaKnown RBP17.43■□□□□ 0.38
TREX1-201ENST00000433541 RAB34Q9BZG1 259 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 UBE2OQ9C0C9 1292 aaKnown RBP17.43■□□□□ 0.38
TREX1-201ENST00000433541 NRBP2Q9NSY0 501 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 MTMR6Q9Y217 621 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 MAFBQ9Y5Q3 323 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms