RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 MRPS9P82933 396 aaKnown RBP17.75■□□□□ 0.43
SF1-208ENST00000432725 TTC38Q5R3I4 469 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 TYW1BQ6NUM6 668 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 XRRA1Q6P2D8 792 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 USP17L6PQ6QN14 398 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 FSIP1Q8NA03 581 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 PPP1R13LQ8WUF5 828 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 CUL5Q93034 780 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 CLSTN2Q9H4D0 955 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
SF1-208ENST00000432725 SRPRBQ9Y5M8 271 aaKnown RBP17.75■□□□□ 0.43
SF1-208ENST00000432725 SPATA31C2B4DYI2 1134 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 HAS3O00219 553 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 GGPS1O95749 300 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 F2P00734 622 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 PFKMP08237 780 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 ADCY7P51828 1080 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 HSDL1Q3SXM5 330 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 GNPTABQ3T906 1256 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 ARL6IP4Q66PJ3 421 aaKnown RBP17.74■□□□□ 0.43
SF1-208ENST00000432725 RBM43Q6ZSC3 357 aaKnown RBP17.74■□□□□ 0.43
SF1-208ENST00000432725 REXO1Q8N1G1 1221 aaKnown RBP17.74■□□□□ 0.43
SF1-208ENST00000432725 ENGASEQ8NFI3 743 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 SCLYQ96I15 445 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 ZFP91Q96JP5 570 aaPredicted RBP17.74■□□□□ 0.43
SF1-208ENST00000432725 TIGD1Q96MW7 591 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 SPATA33Q96N06 139 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 CTAGE1Q96RT6 745 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 CDX2Q99626 313 aaPredicted RBP17.74■□□□□ 0.43
SF1-208ENST00000432725 KATNAL1Q9BW62 490 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
SF1-208ENST00000432725 RIC8AQ9NPQ8 531 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
SF1-208ENST00000432725 SYCE3A1L190 88 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 DNAJB2P25686 324 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 RFC2P35250 354 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 PSEN2P49810 448 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 BFSP2Q13515 415 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 NONOQ15233 471 aaKnown RBP eCLIP17.73■□□□□ 0.431e-6■■■■■ 28.9
SF1-208ENST00000432725 PTGISQ16647 500 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 PCNX4Q63HM2 1172 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 GDF6Q6KF10 455 aaPredicted RBP17.73■□□□□ 0.43
SF1-208ENST00000432725 PIK3AP1Q6ZUJ8 805 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 ELOA2Q8IYF1 753 aaPredicted RBP17.73■□□□□ 0.43
SF1-208ENST00000432725 NAP1L4Q99733 375 aaKnown RBP17.73■□□□□ 0.43
SF1-208ENST00000432725 TNMDQ9H2S6 317 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 PSTPIP2Q9H939 334 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 CXXC1Q9P0U4 656 aaPredicted RBP17.73■□□□□ 0.43
SF1-208ENST00000432725 GTF2IRD1Q9UHL9 959 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 NOD1Q9Y239 953 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 PCDHB6Q9Y5E3 794 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 COL6A3P12111 3177 aa17.73■□□□□ 0.43
SF1-208ENST00000432725 KIAA1217Q5T5P2 1943 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 NR1I2O75469 434 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 CHMP4BP1P59074 171 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 ATP2C1P98194 919 aaPredicted RBP17.72■□□□□ 0.43
SF1-208ENST00000432725 MFSD10Q14728 455 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 RESP18Q5W5W9 173 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 OTOP2Q7RTS6 562 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 FMR1NBQ8N0W7 255 aaPredicted RBP17.72■□□□□ 0.43
SF1-208ENST00000432725 C7orf31Q8N865 590 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 RETREG2Q8NC44 543 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 PYM1Q9BRP8 204 aaKnown RBP17.72■□□□□ 0.43
SF1-208ENST00000432725 PBX4Q9BYU1 374 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 MLXIPQ9HAP2 919 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 FAM13BQ9NYF5 915 aa17.72■□□□□ 0.43
SF1-208ENST00000432725 FBXO2Q9UK22 296 aaPredicted RBP17.72■□□□□ 0.43
SF1-208ENST00000432725 GRXCR1A8MXD5 290 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 CAVIN2O95810 425 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 ZNF286BP0CG31 522 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 MARCKSP29966 332 aaPredicted RBP17.71■□□□□ 0.43
SF1-208ENST00000432725 DEKP35659 375 aaKnown RBP17.71■□□□□ 0.43
SF1-208ENST00000432725 RBL2Q08999 1139 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 SEMA3FQ13275 785 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 SNW1Q13573 536 aaKnown RBP17.71■□□□□ 0.43
SF1-208ENST00000432725 NEDD9Q14511 834 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 KIAA0753Q2KHM9 967 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 CCDC155Q8N6L0 562 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 CAGE1Q8TC20 777 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 TIFAQ96CG3 184 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 CCDC34Q96HJ3 373 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 C16orf70Q9BSU1 422 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 BCAS3Q9H6U6 928 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 HDAC6Q9UBN7 1215 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 HPSEQ9Y251 543 aa17.71■□□□□ 0.43
SF1-208ENST00000432725 SORBS3O60504 671 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 CCDC192P0DO97 292 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 PBX2P40425 430 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 PRPHP41219 470 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 AP3B2Q13367 1082 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 EARS2Q5JPH6 523 aaKnown RBP17.7■□□□□ 0.42
SF1-208ENST00000432725 METTL7BQ6UX53 244 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 SLC17A8Q8NDX2 589 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 SENP7Q9BQF6 1050 aa17.7■□□□□ 0.42
SF1-208ENST00000432725 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
SF1-208ENST00000432725 CLK2P49760 499 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms