RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 EIF2AK2P19525 551 aaKnown RBP9.58□□□□□ -0.88
CDH13-203ENST00000431540 DEFB103AP81534 67 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 MBTPS1Q14703 1052 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 EPC2Q52LR7 807 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 C6orf132Q5T0Z8 1188 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 CWC27Q6UX04 472 aaKnown RBP9.58□□□□□ -0.88
CDH13-203ENST00000431540 CHST3Q7LGC8 479 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 RSPH3Q86UC2 560 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.58□□□□□ -0.88
CDH13-203ENST00000431540 RUFY2Q8WXA3 655 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 ZNF516Q92618 1163 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 CHMP4CQ96CF2 233 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 ZKSCAN3Q9BRR0 538 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 ALG1Q9BT22 464 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 RNPEPQ9H4A4 650 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 LCHNA4D1U4 455 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 NOP56O00567 594 aaKnown RBP9.57□□□□□ -0.88
CDH13-203ENST00000431540 ARHGEF15O94989 841 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 PDE4AP27815 886 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 THPOP40225 353 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 GNAQP50148 359 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 SP2Q02086 613 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 GRM4Q14833 912 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 PCNX4Q63HM2 1172 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 TMEM192Q8IY95 271 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 BANK1Q8NDB2 785 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 CLP1Q92989 425 aaKnown RBP9.57□□□□□ -0.88
CDH13-203ENST00000431540 P2RX5Q93086 422 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 IL17RAQ96F46 866 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 NECAB3Q96P71 396 aaPredicted RBP9.57□□□□□ -0.88
CDH13-203ENST00000431540 POP1Q99575 1024 aaKnown RBP9.57□□□□□ -0.88
CDH13-203ENST00000431540 PRRX2Q99811 253 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 FTHL17Q9BXU8 183 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 NSUN3Q9H649 340 aaKnown RBP9.57□□□□□ -0.88
CDH13-203ENST00000431540 EHMT1Q9H9B1 1298 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 VAT1LQ9HCJ6 419 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 ZNF318Q5VUA4 2279 aa9.57□□□□□ -0.88
CDH13-203ENST00000431540 LGALS2P05162 132 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 SMIM10L2AP0DMW4 78 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 SMIM10L2BP0DMW5 78 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 MYCLP12524 364 aaPredicted RBP9.56□□□□□ -0.88
CDH13-203ENST00000431540 UBA1P22314 1058 aaKnown RBP9.56□□□□□ -0.88
CDH13-203ENST00000431540 BMPR1AP36894 532 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 TROAPQ12815 778 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 GPM6BQ13491 265 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 CTC1Q2NKJ3 1217 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
CDH13-203ENST00000431540 NLRX1Q86UT6 975 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 STAG2Q8N3U4 1231 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 CUL5Q93034 780 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 PPP2R3CQ969Q6 453 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 GPRASP2Q96D09 838 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 YME1L1Q96TA2 773 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 C11orf84Q9BUA3 381 aaPredicted RBP9.56□□□□□ -0.88
CDH13-203ENST00000431540 SPZ1Q9BXG8 430 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 LNPKQ9C0E8 428 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 EVPLQ92817 2033 aa9.56□□□□□ -0.88
CDH13-203ENST00000431540 ATG2AQ2TAZ0 1938 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 WDR81Q562E7 1941 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 MBLAC1A4D2B0 266 aaPredicted RBP9.55□□□□□ -0.88
CDH13-203ENST00000431540 RRN3P2A6NIE6 340 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 KIF5BP33176 963 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 CHMP4BP1P59074 171 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 MRPS9P82933 396 aaKnown RBP9.55□□□□□ -0.88
CDH13-203ENST00000431540 ODR4Q5SWX8 454 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 KRT40Q6A162 431 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDH13-203ENST00000431540 BMP8AQ7Z5Y6 402 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 ADHFE1Q8IWW8 467 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 MYOCDQ8IZQ8 938 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 NME8Q8N427 588 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 FIBCD1Q8N539 461 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 NCOA7Q8NI08 942 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 GDPD5Q8WTR4 605 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 GPR20Q99678 358 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 CPVLQ9H3G5 476 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 C11orf16Q9NQ32 467 aa9.55□□□□□ -0.88
CDH13-203ENST00000431540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.54□□□□□ -0.88
CDH13-203ENST00000431540 TREHO43280 583 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 DCXO43602 365 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
CDH13-203ENST00000431540 ZNF286BP0CG31 522 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 CALM1P0DP23 149 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 CALM2P0DP24 149 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 CALM3P0DP25 149 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 KCNA5P22460 613 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 GGCXP38435 758 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 WTAPQ15007 396 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 SMAD2Q15796 467 aaKnown RBP9.54□□□□□ -0.88
CDH13-203ENST00000431540 CSPP1Q1MSJ5 1256 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 IER5Q5VY09 327 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 CATIPQ7Z7H3 387 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 SEPT1Q8WYJ6 367 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 WNT8BQ93098 351 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 ZNF689Q96CS4 500 aaPredicted RBP9.54□□□□□ -0.88
CDH13-203ENST00000431540 MFSD14AQ96MC6 490 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 C17orf80Q9BSJ5 609 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 IFIH1Q9BYX4 1025 aaKnown RBP9.54□□□□□ -0.88
CDH13-203ENST00000431540 SMARCAD1Q9H4L7 1026 aa9.54□□□□□ -0.88
CDH13-203ENST00000431540 ERAP1Q9NZ08 941 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms