RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 SREBF1P36956 1147 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 ARHGAP4P98171 946 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 SREBF2Q12772 1141 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 PTGDRQ13258 359 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 PPP4R3AQ6IN85 833 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 POTEEQ6S8J3 1075 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 NSMFQ6X4W1 530 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 KRI1Q8N9T8 703 aaKnown RBP9.67□□□□□ -0.86
NUP98-207ENST00000429801 PTPN18Q99952 460 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 PHACTR1Q9C0D0 580 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 PCDHA7Q9UN72 937 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 MAPK8IP1Q9UQF2 711 aa9.67□□□□□ -0.86
NUP98-207ENST00000429801 TMCO5BA8MYB1 307 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 FAM155AB1AL88 458 aaPredicted RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 WNT7AO00755 349 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 NEMFO60524 1076 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 GADD45BO75293 160 aaPredicted RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 CNMDO75829 334 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 RPS6P62753 249 aaKnown RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 CCNA1P78396 465 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 ATP2C1P98194 919 aaPredicted RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 CEP135Q66GS9 1140 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 ARL6IP4Q66PJ3 421 aaKnown RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 MOXD1Q6UVY6 613 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 SPATA21Q7Z572 469 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 RETREG2Q8NC44 543 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 SPOCK2Q92563 424 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 EZH1Q92800 747 aaPredicted RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 FERMT2Q96AC1 680 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 A0A1W2PQ27 194 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 A0A1W2PQ64 194 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 A0A1W2PQD8 194 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 LRRC10BA6NIK2 292 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 CUTAO60888 179 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 CYP3A4P08684 503 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 ZNF24P17028 368 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 ERVK-9P63128 1117 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 ERVK-24P63145 666 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 SMC1AQ14683 1233 aaKnown RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 GPRC5AQ8NFJ5 357 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 SYTL5Q8TDW5 730 aaPredicted RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 CRYGNQ8WXF5 182 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 MTRQ99707 1265 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 MOV10L1Q9BXT6 1211 aaKnown RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 TSGA10Q9BZW7 698 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 CREBZFQ9NS37 354 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 ODF2LQ9ULJ1 636 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 SRPRBQ9Y5M8 271 aaKnown RBP9.66□□□□□ -0.86
NUP98-207ENST00000429801 PFASO15067 1338 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 SMCHD1A6NHR9 2005 aa9.66□□□□□ -0.86
NUP98-207ENST00000429801 CYP3A7-CYP3A51PA0A087WV96 503 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 PTPREP23469 700 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 CYP3A7P24462 503 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 APLP1P51693 650 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 IFT88Q13099 833 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 BAATQ14032 418 aaPredicted RBP9.65□□□□□ -0.86
NUP98-207ENST00000429801 SFMBT2Q5VUG0 894 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 ANKRD35Q8N283 1001 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 SHCBP1Q8NEM2 672 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 MROH8Q9H579 483 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 TXNRD2Q9NNW7 524 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 TBC1D7Q9P0N9 293 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 FBXO2Q9UK22 296 aaPredicted RBP9.65□□□□□ -0.86
NUP98-207ENST00000429801 RBBP6Q7Z6E9 1792 aaKnown RBP9.65□□□□□ -0.86
NUP98-207ENST00000429801 KIF2AO00139 706 aaPredicted RBP9.65□□□□□ -0.86
NUP98-207ENST00000429801 CIITAP33076 1130 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 ZNF76P36508 570 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 PRPHP41219 470 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 SCNN1BP51168 640 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 SLC30A10Q6XR72 485 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 TTC30AQ86WT1 665 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 IFNL1Q8IU54 200 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 C4orf32Q8N8J7 132 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 ZNF579Q8NAF0 562 aaKnown RBP9.65□□□□□ -0.86
NUP98-207ENST00000429801 CYP39A1Q9NYL5 469 aa9.65□□□□□ -0.86
NUP98-207ENST00000429801 DDX25Q9UHL0 483 aaKnown RBP9.65□□□□□ -0.86
NUP98-207ENST00000429801 RPTORQ8N122 1335 aa9.65□□□□□ -0.87
NUP98-207ENST00000429801 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.64□□□□□ -0.87
NUP98-207ENST00000429801 IGF2BP3O00425 579 aaKnown RBP eCLIP9.64□□□□□ -0.87
NUP98-207ENST00000429801 PEX10O60683 326 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 TDP2O95551 362 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 OR52Z1P0C646 297 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 CMA1P23946 247 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 USP8P40818 1118 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 NOGQ13253 232 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 DEFB115Q30KQ5 88 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 Q3C1V9 767 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 DTHD1Q6ZMT9 781 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 CCAR1Q8IX12 1150 aaKnown RBP9.64□□□□□ -0.87
NUP98-207ENST00000429801 REM2Q8IYK8 340 aaPredicted RBP9.64□□□□□ -0.87
NUP98-207ENST00000429801 ANKRD13CQ8N6S4 541 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 MRPS27Q92552 414 aaKnown RBP9.64□□□□□ -0.87
NUP98-207ENST00000429801 RMDN3Q96TC7 470 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 COL20A1Q9P218 1284 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 MORF4L1Q9UBU8 362 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.64□□□□□ -0.87
NUP98-207ENST00000429801 RASSF10A6NK89 507 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 H3BQF6 201 aa9.64□□□□□ -0.87
NUP98-207ENST00000429801 IPO5O00410 1097 aaKnown RBP9.64□□□□□ -0.87
NUP98-207ENST00000429801 EDIL3O43854 480 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms