RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 RPSAP08865 295 aaKnown RBP13.74□□□□□ -0.21
CPNE4-201ENST00000429747 KLRC1P26715 233 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 SMTNP53814 917 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 DR1Q01658 176 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 SEMA3FQ13275 785 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 CAPN12Q6ZSI9 719 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 CCDC63Q8NA47 563 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 IQCGQ9H095 443 aaKnown RBP13.74□□□□□ -0.21
CPNE4-201ENST00000429747 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 LARSQ9P2J5 1176 aaKnown RBP13.74□□□□□ -0.21
CPNE4-201ENST00000429747 CCDC188H7C350 402 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 DAPK3O43293 454 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 KRT15P19012 456 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 SEC24CP53992 1094 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 CTTNQ14247 550 aaKnown RBP13.74□□□□□ -0.21
CPNE4-201ENST00000429747 HIBCHQ6NVY1 386 aaPredicted RBP13.74□□□□□ -0.21
CPNE4-201ENST00000429747 NLRP14Q86W24 1093 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 MMGT1Q8N4V1 131 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 OR2W6PQ8NHA6 318 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 NEK9Q8TD19 979 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 ARL8AQ96BM9 186 aa13.74□□□□□ -0.21
CPNE4-201ENST00000429747 FRMD3A2A2Y4 597 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
CPNE4-201ENST00000429747 PPP1R37O75864 691 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 CACNB3P54284 484 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 ATP11AP98196 1134 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 ITPK1Q13572 414 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
CPNE4-201ENST00000429747 CLUL1Q15846 466 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 CDC37Q16543 378 aaPredicted RBP13.73□□□□□ -0.21
CPNE4-201ENST00000429747 WDR44Q5JSH3 913 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 FBXO33Q7Z6M2 555 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 NKX2-3Q8TAU0 364 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 SSU72P8A0A1W2PR75 194 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 FOSP01100 380 aaPredicted RBP13.73□□□□□ -0.21
CPNE4-201ENST00000429747 ALDH3A1P30838 453 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 ADCY8P40145 1251 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 CORO7P57737 925 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 SNX1Q13596 522 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 SLC18A3Q16572 532 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 FAM133BQ5BKY9 247 aaKnown RBP13.73□□□□□ -0.21
CPNE4-201ENST00000429747 TTBK2Q6IQ55 1244 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 DDX42Q86XP3 938 aaKnown RBP eCLIP13.73□□□□□ -0.21
CPNE4-201ENST00000429747 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 ARHGAP20Q9P2F6 1191 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 FBXL5Q9UKA1 691 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 RIMBP3CA6NJZ7 1639 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 RIMBP3BA6NNM3 1639 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 RIMBP3Q9UFD9 1639 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 RASA1P20936 1047 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 MIER3Q7Z3K6 550 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 CCDC17Q96LX7 622 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 EDEM3Q9BZQ6 932 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 DNAJC17Q9NVM6 304 aaKnown RBP13.73□□□□□ -0.21
CPNE4-201ENST00000429747 TMEM51Q9NW97 253 aa13.73□□□□□ -0.21
CPNE4-201ENST00000429747 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 ZBTB5O15062 677 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 NR3C1P04150 777 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 AKR1B1P15121 316 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 NOC2LQ9Y3T9 749 aaKnown RBP13.72□□□□□ -0.21
CPNE4-201ENST00000429747 SART1O43290 800 aaKnown RBP13.72□□□□□ -0.21
CPNE4-201ENST00000429747 THAP12O43422 761 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 ADGRF4Q8IZF3 695 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 UBE2TQ9NPD8 197 aaPredicted RBP13.72□□□□□ -0.21
CPNE4-201ENST00000429747 MAD2L2Q9UI95 211 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 DNAJC12Q9UKB3 198 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 GMNCA6NCL1 334 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 LRRC10BA6NIK2 292 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 DPH6Q7L8W6 267 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 A0A1W2PQJ5 194 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 RAD51CO43502 376 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 IFNB1P01574 187 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 DLATP10515 647 aaKnown RBP13.72□□□□□ -0.21
CPNE4-201ENST00000429747 KNOP1Q1ED39 458 aaKnown RBP13.72□□□□□ -0.21
CPNE4-201ENST00000429747 OTUD6AQ7L8S5 288 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 NARFQ9UHQ1 456 aa13.72□□□□□ -0.21
CPNE4-201ENST00000429747 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 NT5C2P49902 561 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 ACTN3Q08043 901 aaPredicted RBP13.71□□□□□ -0.21
CPNE4-201ENST00000429747 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 PPP1R14CQ8TAE6 165 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.21
CPNE4-201ENST00000429747 PARVGQ9HBI0 331 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 GRID2IPA4D2P6 1211 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 POLR2MP0CAP2 368 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 LSP1P33241 339 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 NSMFQ6X4W1 530 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 ZNF653Q96CK0 615 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 CCT8L2Q96SF2 557 aa13.71□□□□□ -0.21
CPNE4-201ENST00000429747 ELAC2Q9BQ52 826 aaKnown RBP13.71□□□□□ -0.21
CPNE4-201ENST00000429747 PIK3C2AO00443 1686 aa13.71□□□□□ -0.22
CPNE4-201ENST00000429747 DESP17661 470 aa13.71□□□□□ -0.22
CPNE4-201ENST00000429747 SLC9A1P19634 815 aa13.71□□□□□ -0.22
CPNE4-201ENST00000429747 PHLDB2Q86SQ0 1253 aa13.71□□□□□ -0.22
CPNE4-201ENST00000429747 DUSP9Q99956 384 aaKnown RBP13.71□□□□□ -0.22
CPNE4-201ENST00000429747 PRM3Q9NNZ6 103 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms