RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 UTP14CQ5TAP6 766 aaKnown RBP16.82■□□□□ 0.28
GARNL3-204ENST00000429629 PDXDC2PQ6P474 469 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 DTHD1Q6ZMT9 781 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 KCTD17Q8N5Z5 321 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 C7orf31Q8N865 590 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 IGSF22Q8N9C0 903 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 GJA10Q969M2 543 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 FAM167AQ96KS9 214 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 GTF2IRD1Q9UHL9 959 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
GARNL3-204ENST00000429629 EML1O00423 815 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 BACH1O14867 736 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 TLR3O15455 904 aaKnown RBP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 SLC26A4O43511 780 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 HBP1O60381 514 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 LYPLA2O95372 231 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 CD4P01730 458 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 ZNF286BP0CG31 522 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 XRCC6P12956 609 aaKnown RBP eCLIP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 QARSP47897 775 aaKnown RBP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 NASPP49321 788 aaPredicted RBP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 ATN1P54259 1190 aaPredicted RBP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 RTP1P59025 263 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 PSMC5P62195 406 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 PSMC6P62333 389 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 TLE2Q04725 743 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 NBR1Q14596 966 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 SF3A1Q15459 793 aaKnown RBP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 CCDC60Q8IWA6 550 aaPredicted RBP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 FAM126BQ8IXS8 530 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 ATP8B4Q8TF62 1192 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 BBXQ8WY36 941 aaPredicted RBP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 RNPEPQ9H4A4 650 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 NRBP2Q9NSY0 501 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 RBM19Q9Y4C8 960 aaKnown RBP16.81■□□□□ 0.28
GARNL3-204ENST00000429629 PPME1Q9Y570 386 aa16.81■□□□□ 0.28
GARNL3-204ENST00000429629 MYH7BA7E2Y1 1941 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 IGSF9BQ9UPX0 1349 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 POTEB3A0JP26 581 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 RPLP2P05387 115 aaKnown RBP16.8■□□□□ 0.28
GARNL3-204ENST00000429629 TECP42680 631 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 ADAM17P78536 824 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 SLC39A14Q15043 492 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 PLCB4Q15147 1175 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 PTPAQ15257 358 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 XKR3Q5GH77 459 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 ZNF484Q5JVG2 852 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 POTEBQ6S5H4 581 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 C4orf19Q8IY42 314 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 AK8Q96MA6 479 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 UIMC1Q96RL1 719 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 POLR3CQ9BUI4 534 aaPredicted RBP16.8■□□□□ 0.28
GARNL3-204ENST00000429629 ZSWIM4Q9H7M6 989 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 HDAC6Q9UBN7 1215 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 GABBR1Q9UBS5 961 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 CFAP45Q9UL16 551 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 ZDHHC9Q9Y397 364 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 NR2E3Q9Y5X4 410 aa16.8■□□□□ 0.28
GARNL3-204ENST00000429629 CHMP2AO43633 222 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 EVI5O60447 810 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 SLITRK3O94933 977 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 ATP4AP20648 1035 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 RPA1P27694 616 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
GARNL3-204ENST00000429629 PKP1Q13835 747 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 TRIM60Q495X7 471 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 TRIM50Q86XT4 487 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 ERMNQ8TAM6 284 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 NIFKQ9BYG3 293 aaKnown RBP16.79■□□□□ 0.28
GARNL3-204ENST00000429629 TUFT1Q9NNX1 390 aa16.79■□□□□ 0.28
GARNL3-204ENST00000429629 COL1A2P08123 1366 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 MBLAC1A4D2B0 266 aaPredicted RBP16.78■□□□□ 0.28
GARNL3-204ENST00000429629 ZNF862O60290 1169 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 CAPN15O75808 1086 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 YEATS4O95619 227 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 SMIM10L2AP0DMW4 78 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 SMIM10L2BP0DMW5 78 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 LONP1P36776 959 aaKnown RBP16.78■□□□□ 0.28
GARNL3-204ENST00000429629 FAAP100Q0VG06 881 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 PTK7Q13308 1070 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 IL17AQ16552 155 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 HAUS3Q68CZ6 603 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 NCAPH2Q6IBW4 605 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 RPAINQ86UA6 219 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 EXOC8Q8IYI6 725 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 DPF3Q92784 378 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 USP28Q96RU2 1077 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 EIF2AK1Q9BQI3 630 aaKnown RBP16.78■□□□□ 0.28
GARNL3-204ENST00000429629 LRWD1Q9UFC0 647 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 SRPRBQ9Y5M8 271 aaKnown RBP16.78■□□□□ 0.28
GARNL3-204ENST00000429629 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
GARNL3-204ENST00000429629 MKI67P46013 3256 aaKnown RBP16.77■□□□□ 0.28
GARNL3-204ENST00000429629 KIAA0355O15063 1070 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 B4GALT4O60513 344 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 PPP6R2O75170 966 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 STBD1O95210 358 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 OATP04181 439 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms