RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ADKP55263 362 aaKnown RBP9.65□□□□□ -0.86
CTNND1-208ENST00000428599 YWHAHQ04917 246 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-208ENST00000428599 ANGPTL8Q6UXH0 198 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 LZICQ8WZA0 190 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 SNX19Q92543 992 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 OSBPL3Q9H4L5 887 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 SETBP1Q9Y6X0 1596 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 ELF2Q15723 593 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 HSP90AA5PQ58FG0 334 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 SPATS2Q86XZ4 545 aaKnown RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 URGCPQ8TCY9 931 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 HEXIM2Q96MH2 286 aaKnown RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 ZBTB18Q99592 522 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 TACO1Q9BSH4 297 aaKnown RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 FAF1Q9UNN5 650 aaPredicted RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 TMCC1O94876 653 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 IGKV5-2P06315 115 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 CYP21A2P08686 494 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 USP17L8P0C7I0 530 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 TXNRD1Q16881 649 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 TRIM67Q6ZTA4 783 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 BZW1Q7L1Q6 419 aaKnown RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 DHX36Q9H2U1 1008 aaKnown RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 NXF1Q9UBU9 619 aaKnown RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 PTPN22Q9Y2R2 807 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.87
CTNND1-208ENST00000428599 PTCH1Q13635 1447 aa9.65□□□□□ -0.87
CTNND1-208ENST00000428599 USP31Q70CQ4 1352 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 GCFC2P16383 781 aaKnown RBP9.64□□□□□ -0.87
CTNND1-208ENST00000428599 HSPA6P17066 643 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 PAMP19021 973 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-208ENST00000428599 PTPROQ16827 1216 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 ADCK5Q3MIX3 580 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 RC3H1Q5TC82 1133 aaKnown RBP9.64□□□□□ -0.87
CTNND1-208ENST00000428599 FRA10AC1Q70Z53 315 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 MIGA2Q7L4E1 593 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 SYNE4Q8N205 404 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 PIH1D3Q9NQM4 214 aaKnown RBP9.64□□□□□ -0.87
CTNND1-208ENST00000428599 FIS1Q9Y3D6 152 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 ZBBXA8MT70 800 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 AFPP02771 609 aaKnown RBP9.64□□□□□ -0.87
CTNND1-208ENST00000428599 BMP3P12645 472 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 BRD3Q15059 726 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 HPCAL4Q9UM19 191 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 OCM2P0CE71 109 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 OCMP0CE72 109 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-208ENST00000428599 SCRN1Q12765 414 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 MTERF2Q49AM1 385 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 FAM186BQ8IYM0 893 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 HACD3Q9P035 362 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 BTBD18B2RXH4 712 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 GNGT1P63211 74 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 NUDT18Q6ZVK8 323 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 FAM160B2Q86V87 743 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 TCP11Q8WWU5 503 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 LARP4BQ92615 738 aaKnown RBP9.64□□□□□ -0.87
CTNND1-208ENST00000428599 COA7Q96BR5 231 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 SPATA17Q96L03 361 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 PI4KBQ9UBF8 816 aa9.64□□□□□ -0.87
CTNND1-208ENST00000428599 TAC1P20366 129 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 OAS2P29728 719 aaKnown RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SESN3P58005 492 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 APBA1Q02410 837 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 KIAA1755Q5JYT7 1200 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SYDE2Q5VT97 1194 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 ATG16L1Q676U5 607 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 STAG1Q8WVM7 1258 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 DYNLL2Q96FJ2 89 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 HAUS4Q9H6D7 363 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 PPP1R12AO14974 1030 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 NR2F2P24468 414 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 RCN2Q14257 317 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 EPHA10Q5JZY3 1008 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 TRIM68Q6AZZ1 485 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SZRD1Q7Z422 152 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 PCGF5Q86SE9 256 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SCHIP1Q9P0W5 487 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 PCDHA4Q9UN74 947 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SUGT1Q9Y2Z0 365 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 CYP2D7A0A087X1C5 515 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SLC16A2P36021 539 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 GLE1Q53GS7 698 aaKnown RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 RWDD4Q6NW29 188 aaKnown RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 TTC23LQ6PF05 361 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 EEPD1Q7L9B9 569 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 YAF2Q8IY57 180 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 UHMK1Q8TAS1 419 aaKnown RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 DEPDC1BQ8WUY9 529 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 VPS39Q96JC1 886 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 TRIM15Q9C019 465 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 PHLPP2Q6ZVD8 1323 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 DENND3A2RUS2 1198 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 PAPOLAP51003 745 aaKnown RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 BASP1P80723 227 aaKnown RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 TSPY1Q01534 308 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms