RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 MOXD1Q6UVY6 613 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 ZNF365Q70YC5 407 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 NOSTRINQ8IVI9 506 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 H3BQV1 296 aa17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 TMEM240Q5SV17 173 aa17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 PPP4R3AQ6IN85 833 aa17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 PSRC1Q6PGN9 363 aaPredicted RBP17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 RPUSD2Q8IZ73 545 aaKnown RBP17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 ETNPPLQ8TBG4 499 aa17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 ATP6V0A1Q93050 837 aa17.74■□□□□ 0.43
CLK3P2-201ENST00000427566 FGBP02675 491 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 ACTR2P61160 394 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 HIC1Q14526 733 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 NBR1Q14596 966 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 C16orf59Q7L2K0 433 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 OTOP2Q7RTS6 562 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 SLC5A5Q92911 643 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 PCYT2Q99447 389 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 RNPEPQ9H4A4 650 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 AZI2Q9H6S1 392 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 SETD4Q9NVD3 440 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 TCEAL9Q9UHQ7 104 aa17.73■□□□□ 0.43
CLK3P2-201ENST00000427566 PITPNM1O00562 1244 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 PSMD10O75832 226 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 SYT1P21579 422 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 TOB1P50616 345 aaPredicted RBP17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 CAGE1Q8TC20 777 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 DHX38Q92620 1227 aaKnown RBP17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 HAS1Q92839 578 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 CTAGE1Q96RT6 745 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 FTOQ9C0B1 505 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 SMARCAD1Q9H4L7 1026 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 KCNMB3Q9NPA1 279 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 ERAP1Q9NZ08 941 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 TET1Q8NFU7 2136 aa17.72■□□□□ 0.43
CLK3P2-201ENST00000427566 ZBBXA8MT70 800 aa17.71■□□□□ 0.43
CLK3P2-201ENST00000427566 TREHO43280 583 aa17.71■□□□□ 0.43
CLK3P2-201ENST00000427566 GNAT1P11488 350 aa17.71■□□□□ 0.43
CLK3P2-201ENST00000427566 GCFC2P16383 781 aaKnown RBP17.71■□□□□ 0.43
CLK3P2-201ENST00000427566 PTK7Q13308 1070 aa17.71■□□□□ 0.43
CLK3P2-201ENST00000427566 LRCH2Q5VUJ6 765 aa17.71■□□□□ 0.43
CLK3P2-201ENST00000427566 TBC1D22BQ9NU19 505 aa17.71■□□□□ 0.43
CLK3P2-201ENST00000427566 VPS37CA5D8V6 355 aaPredicted RBP17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 BACH1O14867 736 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 CHMP2AO43633 222 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 ATG7O95352 703 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 CKBP12277 381 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 MCM7P33993 719 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 IGBP1P78318 339 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 ZNF174Q15697 407 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 ABHD15Q6UXT9 468 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 LRRC8DQ7L1W4 858 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 FERMT3Q86UX7 667 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 WNT8BQ93098 351 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 MTIF3Q9H2K0 278 aaKnown RBP17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 TMEM60Q9H2L4 133 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 UNC45AQ9H3U1 944 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 TRPC6Q9Y210 931 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 LOXHD1Q8IVV2 1947 aa17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 RANBP2P49792 3224 aaKnown RBP17.7■□□□□ 0.42
CLK3P2-201ENST00000427566 GAS7O60861 476 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 SELPP16109 830 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 THPOP40225 353 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 STAT5BP51692 787 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 PPFIA1Q13136 1202 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 CCDC60Q8IWA6 550 aaPredicted RBP17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 LMBR1Q8WVP7 490 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 RIT2Q99578 217 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 SAMM50Q9Y512 469 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 PCDHB6Q9Y5E3 794 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 EVPLQ92817 2033 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 EMSYQ7Z589 1322 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 RBAK-RBAKDNI3L0D1 243 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 LGR5O75473 907 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 SLC34A2O95436 690 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 RFC2P35250 354 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 TTC38Q5R3I4 469 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 ZNF618Q5T7W0 954 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 ZNF746Q6NUN9 644 aaPredicted RBP17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 B3GNT9Q6UX72 402 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 Q7L0L9 218 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 NAP1L4Q99733 375 aaKnown RBP17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 TEKT3Q9BXF9 490 aa17.69■□□□□ 0.42
CLK3P2-201ENST00000427566 NRCAMQ92823 1304 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 IGKV6D-21A0A0A0MT36 114 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 NEMFO60524 1076 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 ACTN1P12814 892 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 PDCP20941 246 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 KRT76Q01546 638 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 GRIK4Q16099 956 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 FAM160B1Q5W0V3 765 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 SWSAP1Q6NVH7 229 aa17.68■□□□□ 0.42
CLK3P2-201ENST00000427566 MIS18BP1Q6P0N0 1132 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms