RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 PICK1Q9NRD5 415 aa11.12□□□□□ -0.63
VPS37A-202ENST00000425020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPS37A-202ENST00000425020 PREX1Q8TCU6 1659 aa11.12□□□□□ -0.63
VPS37A-202ENST00000425020 ARHGAP25P42331 645 aa11.12□□□□□ -0.63
VPS37A-202ENST00000425020 LIG4P49917 911 aa11.12□□□□□ -0.63
VPS37A-202ENST00000425020 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
VPS37A-202ENST00000425020 RASA3Q14644 834 aa11.12□□□□□ -0.63
VPS37A-202ENST00000425020 PKN1Q16512 942 aa11.12□□□□□ -0.63
VPS37A-202ENST00000425020 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
VPS37A-202ENST00000425020 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
VPS37A-202ENST00000425020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 GOLGA8SH3BPF8 625 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 ORC4O43929 436 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 CD58P19256 250 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 SESN3P58005 492 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 SCYL2Q6P3W7 929 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 GJB7Q6PEY0 223 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 TRIM65Q6PJ69 517 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 ZNF354CQ86Y25 554 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 PASD1Q8IV76 773 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 LBHD1Q9BQE6 289 aaPredicted RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 JPH2Q9BR39 696 aaPredicted RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 PI4KBQ9UBF8 816 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 FAM169AQ9Y6X4 670 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 TECPR2O15040 1411 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 WDR91A4D1P6 747 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 H3BQF6 201 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 NOP56O00567 594 aaKnown RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 DAPK3O43293 454 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 C21orf2O43822 256 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 NR3C1P04150 777 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 CYP2C19P33261 490 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 SYDE2Q5VT97 1194 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 HHATQ5VTY9 493 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 NEDD1Q8NHV4 660 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 MAK16Q9BXY0 300 aaKnown RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 QTRT2Q9H974 415 aaKnown RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 DMGDHQ9UI17 866 aaKnown RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 TTLL3Q9Y4R7 772 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 CAPN6Q9Y6Q1 641 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 MYO1FO00160 1098 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 SLC37A4O43826 429 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 CARSP49589 748 aaKnown RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 STAT2P52630 851 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 CLNS1AP54105 237 aaKnown RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 IGBP1P78318 339 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 CASC4Q6P4E1 433 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 DYDC2Q96IM9 177 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
VPS37A-202ENST00000425020 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.11□□□□□ -0.63
VPS37A-202ENST00000425020 PPFIA4O75335 1185 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SASH3O75995 380 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 PDE6CP51160 858 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SMAD1Q15797 465 aaKnown RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 ZC2HC1CQ53FD0 456 aaPredicted RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 LIN9Q5TKA1 542 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 TRIM68Q6AZZ1 485 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 APBB1IPQ7Z5R6 666 aaPredicted RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 FUT8Q9BYC5 575 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 C1orf112Q9NSG2 853 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 MRPL11Q9Y3B7 192 aaKnown RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 DIP2BQ9P265 1576 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 STXBP3O00186 592 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 MYL1P05976 194 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 H2AFXP16104 143 aaPredicted RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 FERP16591 822 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 CRKP46108 304 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 MXI1P50539 228 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SEC24CP53992 1094 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 HDLBPQ00341 1268 aaKnown RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 LRRC14Q15048 493 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SEPT12Q8IYM1 358 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 DEPTORQ8TB45 409 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SAAL1Q96ER3 474 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 CEP170P1Q96L14 293 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 FMO2Q99518 471 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 ZNF446Q9NWS9 450 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SNX12Q9UMY4 172 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 EXOC7Q9UPT5 735 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 REREQ9P2R6 1566 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 ZBED4O75132 1171 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SRGNP10124 158 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 GCFC2P16383 781 aaKnown RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 KLRC1P26715 233 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SEC23AQ15436 765 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 CCDC13Q8IYE1 715 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 GUF1Q8N442 669 aaKnown RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SWAP70Q9UH65 585 aa11.1□□□□□ -0.63
VPS37A-202ENST00000425020 SEPT9Q9UHD8 586 aaPredicted RBP11.1□□□□□ -0.63
VPS37A-202ENST00000425020 ZSCAN5CA6NGD5 496 aaPredicted RBP11.09□□□□□ -0.63
VPS37A-202ENST00000425020 FOSP01100 380 aaPredicted RBP11.09□□□□□ -0.63
VPS37A-202ENST00000425020 MAGOHP61326 146 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms