RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 TMEM60Q9H2L4 133 aa16.71■□□□□ 0.27
TMEM248-204ENST00000424964 RNPEPQ9H4A4 650 aa16.71■□□□□ 0.27
TMEM248-204ENST00000424964 PDLIM7Q9NR12 457 aa16.71■□□□□ 0.27
TMEM248-204ENST00000424964 TRMT13Q9NUP7 481 aaKnown RBP16.71■□□□□ 0.27
TMEM248-204ENST00000424964 GABBR1Q9UBS5 961 aa16.71■□□□□ 0.27
TMEM248-204ENST00000424964 GTF2IRD1Q9UHL9 959 aa16.71■□□□□ 0.27
TMEM248-204ENST00000424964 PCDHA12Q9UN75 941 aa16.71■□□□□ 0.27
TMEM248-204ENST00000424964 TRIP12Q14669 1992 aaPredicted RBP16.71■□□□□ 0.27
TMEM248-204ENST00000424964 IGKV6D-21A0A0A0MT36 114 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 PPP2R5CQ13362 524 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 PTGISQ16647 500 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 BRAPQ7Z569 592 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 CKAP2LQ8IYA6 745 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 RDM1Q8NG50 284 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 TRPC6Q9Y210 931 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 MTMR6Q9Y217 621 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 PCDHB6Q9Y5E3 794 aa16.7■□□□□ 0.26
TMEM248-204ENST00000424964 WDR81Q562E7 1941 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 C17orf102A2RUQ5 167 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 GNAT1P11488 350 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 SLC26A2P50443 739 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 NCAPH2Q6IBW4 605 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 B3GNT9Q6UX72 402 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 TRMT1LQ7Z2T5 733 aaKnown RBP16.69■□□□□ 0.26
TMEM248-204ENST00000424964 AFAP1L1Q8TED9 768 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 TNPO1Q92973 898 aaKnown RBP16.69■□□□□ 0.26
TMEM248-204ENST00000424964 MTMR9Q96QG7 549 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 TTC12Q9H892 705 aaPredicted RBP16.69■□□□□ 0.26
TMEM248-204ENST00000424964 SETD4Q9NVD3 440 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 VAV3Q9UKW4 847 aa16.69■□□□□ 0.26
TMEM248-204ENST00000424964 POTEB3A0JP26 581 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 TRIM43BA6NCK2 446 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 EML1O00423 815 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 KIAA0355O15063 1070 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 OR52Z1P0C646 297 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 CYP2C9P11712 490 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 RAG1P15918 1043 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 ZNF200P98182 395 aaPredicted RBP16.68■□□□□ 0.26
TMEM248-204ENST00000424964 PPFIA1Q13136 1202 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 PTGDRQ13258 359 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 PLCB4Q15147 1175 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 POTEBQ6S5H4 581 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 ATP6V0A1Q93050 837 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 TRIM43Q96BQ3 446 aaPredicted RBP16.68■□□□□ 0.26
TMEM248-204ENST00000424964 LBHD1Q9BQE6 289 aaPredicted RBP16.68■□□□□ 0.26
TMEM248-204ENST00000424964 PCDH10Q9P2E7 1040 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 MAFBQ9Y5Q3 323 aaPredicted RBP16.68■□□□□ 0.26
TMEM248-204ENST00000424964 NRCAMQ92823 1304 aa16.68■□□□□ 0.26
TMEM248-204ENST00000424964 TNRC18O15417 2968 aaPredicted RBP16.68■□□□□ 0.26
TMEM248-204ENST00000424964 PDIA4P13667 645 aaKnown RBP16.67■□□□□ 0.26
TMEM248-204ENST00000424964 IGBP1P78318 339 aa16.67■□□□□ 0.26
TMEM248-204ENST00000424964 RESTQ13127 1097 aa16.67■□□□□ 0.26
TMEM248-204ENST00000424964 HIC1Q14526 733 aa16.67■□□□□ 0.26
TMEM248-204ENST00000424964 FOXD4L5Q5VV16 416 aaPredicted RBP16.67■□□□□ 0.26
TMEM248-204ENST00000424964 FOXD4L4Q8WXT5 416 aaPredicted RBP16.67■□□□□ 0.26
TMEM248-204ENST00000424964 PPP1R12CQ9BZL4 782 aa16.67■□□□□ 0.26
TMEM248-204ENST00000424964 HIPK3Q9H422 1215 aa16.67■□□□□ 0.26
TMEM248-204ENST00000424964 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
TMEM248-204ENST00000424964 TBX21Q9UL17 535 aa16.67■□□□□ 0.26
TMEM248-204ENST00000424964 RRN3P2A6NIE6 340 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 TREHO43280 583 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 HBP1O60381 514 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 INSRRP14616 1297 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 ATP4AP20648 1035 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 TECP42680 631 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 EPHA7Q15375 998 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 GRIK4Q16099 956 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 UGCGQ16739 394 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 C4orf32Q8N8J7 132 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 BANK1Q8NDB2 785 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 ATP8B4Q8TF62 1192 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 LMBR1Q8WVP7 490 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 ZSCAN16Q9H4T2 348 aaPredicted RBP16.66■□□□□ 0.26
TMEM248-204ENST00000424964 IGSF9BQ9UPX0 1349 aa16.66■□□□□ 0.26
TMEM248-204ENST00000424964 ZNF862O60290 1169 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 TIMP1P01033 207 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 P4HBP07237 508 aaKnown RBP16.65■□□□□ 0.26
TMEM248-204ENST00000424964 ITGB8P26012 769 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 CYP2C18P33260 490 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 MDM2Q00987 491 aaPredicted RBP16.65■□□□□ 0.26
TMEM248-204ENST00000424964 SPIRE1Q08AE8 756 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 PTK7Q13308 1070 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 TMEM266Q2M3C6 531 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 RETREG2Q8NC44 543 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 BBXQ8WY36 941 aaPredicted RBP16.65■□□□□ 0.26
TMEM248-204ENST00000424964 BADQ92934 168 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 FAM167AQ96KS9 214 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
TMEM248-204ENST00000424964 NRBP2Q9NSY0 501 aa16.65■□□□□ 0.26
TMEM248-204ENST00000424964 CEP290O15078 2479 aa16.64■□□□□ 0.26
TMEM248-204ENST00000424964 POTEMA6NI47 508 aa16.64■□□□□ 0.25
TMEM248-204ENST00000424964 LAD1O00515 517 aa16.64■□□□□ 0.25
TMEM248-204ENST00000424964 DKC1O60832 514 aaKnown RBP eCLIP16.64■□□□□ 0.25
TMEM248-204ENST00000424964 OATP04181 439 aa16.64■□□□□ 0.25
TMEM248-204ENST00000424964 HOXC8P31273 242 aa16.64■□□□□ 0.25
TMEM248-204ENST00000424964 QARSP47897 775 aaKnown RBP16.64■□□□□ 0.25
TMEM248-204ENST00000424964 PSMC5P62195 406 aa16.64■□□□□ 0.25
TMEM248-204ENST00000424964 PRKCEQ02156 737 aa16.64■□□□□ 0.25
TMEM248-204ENST00000424964 BFSP2Q13515 415 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms