RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MAF1Q9H063 256 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 NPHP3-ACAD11A0A0J9YXS1 232 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 ZNF862O60290 1169 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 PNOCQ13519 176 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 METTL7BQ6UX53 244 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 PCYT2Q99447 389 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 HSD17B14Q9BPX1 270 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 MAFGO15525 162 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 MTFR1Q15390 333 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 E2F4Q16254 413 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 MAEAQ7L5Y9 396 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 GPR20Q99678 358 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 WDR64B1ANS9 1081 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 ACTN4O43707 911 aaKnown RBP15.06■□□□□ 0
PRPF39-202ENST00000424478 GRK4P32298 578 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 TXLNAP40222 546 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 NEDD9Q14511 834 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 DUSP28Q4G0W2 176 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 TLK2Q86UE8 772 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 CNNM3Q8NE01 707 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 BLOC1S4Q9NUP1 217 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 MYH9P35579 1960 aaKnown RBP15.06■□□□□ 0
PRPF39-202ENST00000424478 KIAA0100Q14667 2235 aaKnown RBP15.06■□□□□ 0
PRPF39-202ENST00000424478 KINO60870 393 aaKnown RBP15.06■□□□□ 0
PRPF39-202ENST00000424478 TGFB3P10600 412 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 NPEPPSP55786 919 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 KRT76Q01546 638 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 ABHD15Q6UXT9 468 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 CALML4Q96GE6 196 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 AK8Q96MA6 479 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 SENP7Q9BQF6 1050 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 CCSER1Q9C0I3 900 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 PCDHA10Q9Y5I2 948 aa15.06■□□□□ 0
PRPF39-202ENST00000424478 KLHL40Q2TBA0 621 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 NFASCO94856 1347 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 BIN1O00499 593 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 GH1P01241 217 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 HMGCRP04035 888 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 C6orf222P0C671 652 aaPredicted RBP15.05■□□□□ -0
PRPF39-202ENST00000424478 ATP4AP20648 1035 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 EPHA7Q15375 998 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 PDXDC2PQ6P474 469 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 KRBA2Q6ZNG9 492 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 DYMQ7RTS9 669 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 GLG1Q92896 1179 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 BHMT2Q9H2M3 363 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 GNEQ9Y223 722 aaKnown RBP15.05■□□□□ -0
PRPF39-202ENST00000424478 PTPN22Q9Y2R2 807 aa15.05■□□□□ -0
PRPF39-202ENST00000424478 LAMA2P24043 3122 aaKnown RBP15.05■□□□□ -0
PRPF39-202ENST00000424478 RBM47A0AV96 593 aaKnown RBP15.04■□□□□ -0
PRPF39-202ENST00000424478 SUPT20HL2P0C7V6 817 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 RPA1P27694 616 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 SOX10P56693 466 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 ZNF746Q6NUN9 644 aaPredicted RBP15.04■□□□□ -0
PRPF39-202ENST00000424478 IRF5Q13568 498 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 ERMNQ8TAM6 284 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 TRAPPC12Q8WVT3 735 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 FAM184BQ9ULE4 1060 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 MORC2Q9Y6X9 1032 aaPredicted RBP15.04■□□□□ -0
PRPF39-202ENST00000424478 SYCE3A1L190 88 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 MBD3O95983 291 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 CUL4BQ13620 913 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 IQSEC1Q6DN90 963 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 MSL3Q8N5Y2 521 aaKnown RBP15.04■□□□□ -0
PRPF39-202ENST00000424478 HPS3Q969F9 1004 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 NUP62CLQ9H1M0 184 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 CCDC39Q9UFE4 941 aa15.04■□□□□ -0
PRPF39-202ENST00000424478 QARSP47897 775 aaKnown RBP15.03■□□□□ -0
PRPF39-202ENST00000424478 PRKCEQ02156 737 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 TMEM119Q4V9L6 283 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 HAUS3Q68CZ6 603 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 SEPT1Q8WYJ6 367 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 PAGE5Q96GU1 130 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 UNC93B1Q9H1C4 597 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 ZNF302Q9NR11 478 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 FAM237AA0A1B0GTK4 181 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 AKR1A1P14550 325 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 SLC9C1Q4G0N8 1177 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 MIS18BP1Q6P0N0 1132 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 IQUBQ8NA54 791 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 TNMDQ9H2S6 317 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 RNPEPQ9H4A4 650 aa15.03■□□□□ -0
PRPF39-202ENST00000424478 SEPT9Q9UHD8 586 aaPredicted RBP15.03■□□□□ -0
PRPF39-202ENST00000424478 SYNRGQ9UMZ2 1314 aa15.02■□□□□ -0
PRPF39-202ENST00000424478 LOC102724159A0A0B4J2E5 919 aa15.02■□□□□ -0
PRPF39-202ENST00000424478 P4HBP07237 508 aaKnown RBP15.02■□□□□ -0
PRPF39-202ENST00000424478 PSAPP07602 524 aa15.02■□□□□ -0
PRPF39-202ENST00000424478 MMP3P08254 477 aa15.02■□□□□ -0
PRPF39-202ENST00000424478 JAK3P52333 1124 aa15.02■□□□□ -0
PRPF39-202ENST00000424478 PWP2Q15269 919 aaKnown RBP15.02■□□□□ -0
PRPF39-202ENST00000424478 ANO5Q75V66 913 aa15.02■□□□□ -0
PRPF39-202ENST00000424478 CEP57L1Q8IYX8 460 aa15.02■□□□□ -0
PRPF39-202ENST00000424478 SFI1A8K8P3 1242 aa15.02□□□□□ -0.01
PRPF39-202ENST00000424478 IGBP1P78318 339 aa15.02□□□□□ -0.01
PRPF39-202ENST00000424478 KCNV1Q6PIU1 500 aa15.02□□□□□ -0.01
PRPF39-202ENST00000424478 LARP4BQ92615 738 aaKnown RBP15.02□□□□□ -0.01
PRPF39-202ENST00000424478 RAD54LQ92698 747 aa15.02□□□□□ -0.01
PRPF39-202ENST00000424478 RUSC1Q9BVN2 902 aa15.02□□□□□ -0.01
PRPF39-202ENST00000424478 CLSTN2Q9H4D0 955 aa15.02□□□□□ -0.01
PRPF39-202ENST00000424478 LGALS2P05162 132 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms