RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 NR3C2P08235 984 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 GAP43P17677 238 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 KMT5BQ4FZB7 885 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 LIN9Q5TKA1 542 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 TWF2Q6IBS0 349 aaKnown RBP10.67□□□□□ -0.7
CMSS1-201ENST00000421999 DDX12PQ92771 950 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 OPTNQ96CV9 577 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 RGL1Q9NZL6 768 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 MKRN1Q9UHC7 482 aaKnown RBP10.67□□□□□ -0.7
CMSS1-201ENST00000421999 PPP1R9AQ9ULJ8 1098 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 INPP5FQ9Y2H2 1132 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 GDAQ9Y2T3 454 aa10.67□□□□□ -0.7
CMSS1-201ENST00000421999 NPM3O75607 178 aaKnown RBP10.66□□□□□ -0.7
CMSS1-201ENST00000421999 ICAM1P05362 532 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 FGRP09769 529 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 PTPRAP18433 802 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 STAT1P42224 750 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 TOB1P50616 345 aaPredicted RBP10.66□□□□□ -0.7
CMSS1-201ENST00000421999 PRELPP51888 382 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 TERF1P54274 439 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 YWHAEP62258 255 aaKnown RBP10.66□□□□□ -0.7
CMSS1-201ENST00000421999 SPATA1Q5VX52 437 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 NKX2-3Q8TAU0 364 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 CTTNBP2NLQ9P2B4 639 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 USTQ9Y2C2 406 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 EARS2Q5JPH6 523 aaKnown RBP10.66□□□□□ -0.7
CMSS1-201ENST00000421999 MB21D1Q8N884 522 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 IPO4Q8TEX9 1081 aaKnown RBP10.66□□□□□ -0.7
CMSS1-201ENST00000421999 LRRC45Q96CN5 670 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 IL17RAQ96F46 866 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 ACCSQ96QU6 501 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 SH2D3AQ9BRG2 576 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 ZNF302Q9NR11 478 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 KCNJ18B7U540 433 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 ARPP19P56211 112 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 LACTBP83111 547 aaPredicted RBP10.66□□□□□ -0.7
CMSS1-201ENST00000421999 VGLL4Q14135 290 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 KCNJ12Q14500 433 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 PTPN21Q16825 1174 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 PSPC1Q8WXF1 523 aaKnown RBP10.66□□□□□ -0.7
CMSS1-201ENST00000421999 TAAR1Q96RJ0 339 aa10.66□□□□□ -0.7
CMSS1-201ENST00000421999 MAK16Q9BXY0 300 aaKnown RBP10.66□□□□□ -0.7
CMSS1-201ENST00000421999 NFIBO00712 420 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 EIF3JO75822 258 aaKnown RBP10.65□□□□□ -0.7
CMSS1-201ENST00000421999 QARSP47897 775 aaKnown RBP10.65□□□□□ -0.7
CMSS1-201ENST00000421999 DGKZQ13574 1117 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 TATDN1Q6P1N9 297 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 OR6J1Q8NGC5 347 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 NUP58Q9BVL2 599 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 LSM14BQ9BX40 385 aaKnown RBP10.65□□□□□ -0.7
CMSS1-201ENST00000421999 NXF1Q9UBU9 619 aaKnown RBP10.65□□□□□ -0.7
CMSS1-201ENST00000421999 CPA4Q9UI42 421 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 SLC25A27O95847 323 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 MAGEA1P43355 309 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 ORC2Q13416 577 aaPredicted RBP10.65□□□□□ -0.7
CMSS1-201ENST00000421999 ZNF658Q5TYW1 1059 aaPredicted RBP10.65□□□□□ -0.7
CMSS1-201ENST00000421999 TYW1BQ6NUM6 668 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 GBP6Q6ZN66 633 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 OTUD6BQ8N6M0 293 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 MCPH1Q8NEM0 835 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 CCDC94Q9BW85 323 aaPredicted RBP10.65□□□□□ -0.7
CMSS1-201ENST00000421999 EMILIN3Q9NT22 766 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 CAPN9O14815 690 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 TRIM14Q14142 442 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 CYFIP1Q7L576 1253 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 SLC17A8Q8NDX2 589 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 MKL1Q969V6 931 aa10.65□□□□□ -0.7
CMSS1-201ENST00000421999 TNNC1P63316 161 aa10.65□□□□□ -0.71
CMSS1-201ENST00000421999 MAPK6Q16659 721 aa10.65□□□□□ -0.71
CMSS1-201ENST00000421999 ZNF569Q5MCW4 686 aa10.65□□□□□ -0.71
CMSS1-201ENST00000421999 PADI6Q6TGC4 694 aa10.65□□□□□ -0.71
CMSS1-201ENST00000421999 DLK2Q6UY11 383 aa10.65□□□□□ -0.71
CMSS1-201ENST00000421999 EIF2AK1Q9BQI3 630 aaKnown RBP10.65□□□□□ -0.71
CMSS1-201ENST00000421999 MYO1AQ9UBC5 1043 aa10.65□□□□□ -0.71
CMSS1-201ENST00000421999 GLTPD2A6NH11 291 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 SLC37A4O43826 429 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 P4HBP07237 508 aaKnown RBP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 ERCC5P28715 1186 aaPredicted RBP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 FKBP3Q00688 224 aaKnown RBP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 GNASQ5JWF2 1037 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 FAM186BQ8IYM0 893 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 CAPZA3Q96KX2 299 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 SAMSN1Q9NSI8 373 aaKnown RBP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 ZKSCAN5Q9Y2L8 839 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 PCDHA10Q9Y5I2 948 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 GOLGA8IPA6NC78 632 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 GOLGA8JA6NMD2 632 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 MYL1P05976 194 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 PIK3CAP42336 1068 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 PTPAQ15257 358 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 SFMBT2Q5VUG0 894 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 RHPN2Q8IUC4 686 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 DAGLBQ8NCG7 672 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 TCP11Q8WWU5 503 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 SLC9A2Q9UBY0 812 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 FZD9O00144 591 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms