RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SEL1LQ9UBV2 794 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 ODF2LQ9ULJ1 636 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 ARHGAP6O43182 974 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 UBXN1Q04323 297 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 ITGB3BPQ13352 177 aaPredicted RBP18.61■□□□□ 0.57
SSBP3-205ENST00000417664 TTLL12Q14166 644 aaPredicted RBP18.61■□□□□ 0.57
SSBP3-205ENST00000417664 PLS1Q14651 629 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 DNTTIP2Q5QJE6 756 aaKnown RBP18.61■□□□□ 0.57
SSBP3-205ENST00000417664 DLK2Q6UY11 383 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 C1orf186Q6ZWK4 172 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 FASTKD5Q7L8L6 764 aaKnown RBP18.61■□□□□ 0.57
SSBP3-205ENST00000417664 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 ZNF507Q8TCN5 953 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 IQCDQ96DY2 449 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 OTUD5Q96G74 571 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 CEP63Q96MT8 703 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 A0A0G2JMZ2 1700 aa18.61■□□□□ 0.57
SSBP3-205ENST00000417664 NPHP3-ACAD11A0A0J9YXS1 232 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 GNA14O95837 355 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 COPB2P35606 906 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 EDRF1Q3B7T1 1238 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 GADL1Q6ZQY3 521 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 PIGOQ8TEQ8 1089 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 ZFP91Q96JP5 570 aaPredicted RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 BAG1Q99933 345 aaPredicted RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 SENP7Q9BQF6 1050 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 DBR1Q9UK59 544 aaKnown RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 AGTPBP1Q9UPW5 1226 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 TESPA1A2RU30 521 aaPredicted RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 WDR64B1ANS9 1081 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 PRKCSHP14314 528 aaPredicted RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 GUCY2CP25092 1073 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 MTIF2P46199 727 aaKnown RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 QARSP47897 775 aaKnown RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 TERF1P54274 439 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 BMT2Q1RMZ1 405 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 GNPTABQ3T906 1256 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 ZNF746Q6NUN9 644 aaPredicted RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 CCAR2Q8N163 923 aaKnown RBP18.6■□□□□ 0.57
SSBP3-205ENST00000417664 RETREG2Q8NC44 543 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 SCFD1Q8WVM8 642 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 CNKSR2Q8WXI2 1034 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 RUSC1Q9BVN2 902 aa18.6■□□□□ 0.57
SSBP3-205ENST00000417664 LRRC41Q15345 812 aa18.59■□□□□ 0.57
SSBP3-205ENST00000417664 EAPPQ56P03 285 aaPredicted RBP18.59■□□□□ 0.57
SSBP3-205ENST00000417664 LDLRAD1Q5T700 205 aa18.59■□□□□ 0.57
SSBP3-205ENST00000417664 LRRC55Q6ZSA7 311 aa18.59■□□□□ 0.57
SSBP3-205ENST00000417664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.59■□□□□ 0.573e-6■■■■□ 23.5
SSBP3-205ENST00000417664 EPM2AIP1Q7L775 607 aaPredicted RBP18.59■□□□□ 0.57
SSBP3-205ENST00000417664 CLMNQ96JQ2 1002 aa18.59■□□□□ 0.57
SSBP3-205ENST00000417664 NOC4LQ9BVI4 516 aaKnown RBP18.59■□□□□ 0.57
SSBP3-205ENST00000417664 NUP58Q9BVL2 599 aa18.59■□□□□ 0.57
SSBP3-205ENST00000417664 KCTD10Q9H3F6 313 aa18.59■□□□□ 0.57
SSBP3-205ENST00000417664 ZHX3Q9H4I2 956 aa18.59■□□□□ 0.57
SSBP3-205ENST00000417664 NFASCO94856 1347 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 ARHGEF35A5YM69 484 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 EIF3DO15371 548 aaKnown RBP eCLIP18.58■□□□□ 0.57
SSBP3-205ENST00000417664 FAM13AO94988 1023 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 SLC25A27O95847 323 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 TUBB4AP04350 444 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 ZNF131P52739 623 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.57
SSBP3-205ENST00000417664 RBL2Q08999 1139 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 RAD51AP2Q09MP3 1159 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 FKBP15Q5T1M5 1219 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 STXBP4Q6ZWJ1 553 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 SFR1Q86XK3 245 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 TMEM139Q8IV31 216 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 ZC3H3Q8IXZ2 948 aaKnown RBP18.58■□□□□ 0.57
SSBP3-205ENST00000417664 C4orf19Q8IY42 314 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 TIPINQ9BVW5 301 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 PARVGQ9HBI0 331 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 TRAF3IP3Q9Y228 551 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 SAMM50Q9Y512 469 aa18.58■□□□□ 0.57
SSBP3-205ENST00000417664 KIF2AO00139 706 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 DDX39AO00148 427 aaKnown RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 DKC1O60832 514 aaKnown RBP eCLIP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 MFAP3LO75121 409 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 GYPCP04921 128 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 ADKP55263 362 aaKnown RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 MARSP56192 900 aaKnown RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 MAN2A1Q16706 1144 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 PTPN21Q16825 1174 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 KNOP1Q1ED39 458 aaKnown RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 SMAP1Q8IYB5 467 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 ANKRD35Q8N283 1001 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 BANK1Q8NDB2 785 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 GLIS3Q8NEA6 775 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 ERGIC2Q96RQ1 377 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 ASCC2Q9H1I8 757 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 TBC1D7Q9P0N9 293 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 WRAP73Q9P2S5 460 aaPredicted RBP18.57■□□□□ 0.56
SSBP3-205ENST00000417664 UBE4BO95155 1302 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 TRAF5O00463 557 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 PDXKO00764 312 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 OSBPP22059 807 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 FECHP22830 423 aa18.57■□□□□ 0.56
SSBP3-205ENST00000417664 PSMC5P62195 406 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms