RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 ZNF24P17028 368 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 TRIM21P19474 475 aaKnown RBP6.96□□□□□ -1.29
CCNT1-202ENST00000417344 TOB1P50616 345 aaPredicted RBP6.96□□□□□ -1.29
CCNT1-202ENST00000417344 RRAGBQ5VZM2 374 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 CC2D2BQ6DHV5 1058 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 GALNT17Q6IS24 598 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 KRT26Q7Z3Y9 468 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.96□□□□□ -1.29
CCNT1-202ENST00000417344 ZNF507Q8TCN5 953 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 ASAP3Q8TDY4 903 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 STK32AQ8WU08 396 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 C17orf50Q8WW18 174 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 NELFBQ8WX92 580 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 PTPRN2Q92932 1015 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 AZIN2Q96A70 460 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 IQCDQ96DY2 449 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 SUCLG2Q96I99 432 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 RAB3IPQ96QF0 476 aaPredicted RBP6.96□□□□□ -1.29
CCNT1-202ENST00000417344 TTYH3Q9C0H2 523 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 CSRNP2Q9H175 543 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 ATP8A2Q9NTI2 1148 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 CYP39A1Q9NYL5 469 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 DBF4Q9UBU7 674 aaPredicted RBP6.96□□□□□ -1.29
CCNT1-202ENST00000417344 FKBPLQ9UIM3 349 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 FBXL5Q9UKA1 691 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 LAMA4Q16363 1823 aa6.96□□□□□ -1.29
CCNT1-202ENST00000417344 PDS5AQ29RF7 1337 aaKnown RBP6.96□□□□□ -1.3
CCNT1-202ENST00000417344 NEO1Q92859 1461 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 TMEM221A6NGB7 291 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 SNX3O60493 162 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 PFDN1O60925 122 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 SHBGP04278 402 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 CCDC166P0CW27 439 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 TPBGLP0DKB5 382 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 GJA8P48165 433 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 METAP2P50579 478 aaKnown RBP eCLIP6.96□□□□□ -1.3
CCNT1-202ENST00000417344 BPIFB4P59827 614 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 ERVK-9P63128 1117 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 TNNC1P63316 161 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 LMNB2Q03252 620 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 FAM69CQ0P6D2 419 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 TNNI3KQ59H18 835 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 RILPL1Q5EBL4 403 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 KLHDC7AQ5VTJ3 777 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 MB21D2Q8IYB1 491 aaPredicted RBP6.96□□□□□ -1.3
CCNT1-202ENST00000417344 ARHGAP18Q8N392 663 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 RETREG2Q8NC44 543 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 UCMAQ8WVF2 138 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 NCSTNQ92542 709 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 PHKBQ93100 1093 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 LTV1Q96GA3 475 aaPredicted RBP6.96□□□□□ -1.3
CCNT1-202ENST00000417344 KAZALD1Q96I82 304 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 NLRP3Q96P20 1036 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 TIPINQ9BVW5 301 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 CCDC134Q9H6E4 229 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 STRN4Q9NRL3 753 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 RHBDL2Q9NX52 303 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 VPS54Q9P1Q0 977 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 CTTNBP2NLQ9P2B4 639 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 MAP10Q9P2G4 905 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 SUN2Q9UH99 717 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 PNMA2Q9UL42 364 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 WDR37Q9Y2I8 494 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 GPSM3Q9Y4H4 160 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 SLC4A7Q9Y6M7 1214 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 FPGT-TNNI3KV9GXZ4 949 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 MYH8P13535 1937 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 LRRC37A3O60309 1634 aa6.96□□□□□ -1.3
CCNT1-202ENST00000417344 PALLDQ8WX93 1383 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 RGPD1P0DJD0 1748 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 SPATA31D1Q6ZQQ2 1576 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 BCL9O00512 1426 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 A0A087X0B3 334 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 RNF223E7ERA6 249 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 H7C1D1 291 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 PEX11AO75192 247 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 E2F6O75461 281 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 OAS1P00973 400 aaKnown RBP6.95□□□□□ -1.3
CCNT1-202ENST00000417344 CCNB1P14635 433 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 EEF1GP26641 437 aaKnown RBP6.95□□□□□ -1.3
CCNT1-202ENST00000417344 SKIV2L2P42285 1042 aaKnown RBP6.95□□□□□ -1.3
CCNT1-202ENST00000417344 MMP13P45452 471 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 SERPINB4P48594 390 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 PTDSS1P48651 473 aaKnown RBP6.95□□□□□ -1.3
CCNT1-202ENST00000417344 DNM2P50570 870 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 PDE6CP51160 858 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 ANTXR2P58335 489 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 MUM1Q2TAK8 710 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 CEP128Q6ZU80 1094 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 ZNF365Q70YC5 407 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 DZIP3Q86Y13 1208 aaKnown RBP6.95□□□□□ -1.3
CCNT1-202ENST00000417344 ENDOVQ8N8Q3 282 aaKnown RBP6.95□□□□□ -1.3
CCNT1-202ENST00000417344 RBBP8NLQ8NC74 664 aaPredicted RBP6.95□□□□□ -1.3
CCNT1-202ENST00000417344 KLHDC4Q8TBB5 520 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 PIGOQ8TEQ8 1089 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 SLC35B4Q969S0 331 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 POM121Q96HA1 1249 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 NOX5Q96PH1 765 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 GBP5Q96PP8 586 aa6.95□□□□□ -1.3
CCNT1-202ENST00000417344 PRMT1Q99873 361 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms