RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 NELFAQ9H3P2 528 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 FBXL7Q9UJT9 491 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 WASF3Q9UPY6 502 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 PTPN22Q9Y2R2 807 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 CAPN14A8MX76 684 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 ARHGAP6O43182 974 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 PEX11BO96011 259 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 HMGCRP04035 888 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 CCDC142Q17RM4 750 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 CD276Q5ZPR3 534 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 ADGRE4PQ86SQ3 457 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 PROSER1Q86XN7 944 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 D2HGDHQ8N465 521 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 ZNF703Q9H7S9 590 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 FBXO10Q9UK96 956 aa5.03□□□□□ -1.6
TRAPPC13-203ENST00000415825 ZNF839A8K0R7 811 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 PLSCR1O15162 318 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 MEOX1P50221 254 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 LAIR1Q6GTX8 287 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 EP400NLQ6ZTU2 488 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 ULK2Q8IYT8 1036 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 CLEC4DQ8WXI8 215 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 JAM3Q9BX67 310 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 PLA2G3Q9NZ20 509 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 ARHGAP28Q9P2N2 729 aa5.02□□□□□ -1.61
TRAPPC13-203ENST00000415825 NUDT3O95989 172 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 LCP1P13796 627 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 PTGS2P35354 604 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 ETV4P43268 484 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 GRM7Q14831 915 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 PRSS53Q2L4Q9 553 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 ZNF227Q86WZ6 799 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 KCTD13Q8WZ19 329 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 PTGFRNQ9P2B2 879 aa5.01□□□□□ -1.61
TRAPPC13-203ENST00000415825 FOXN1O15353 648 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 GJA8P48165 433 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 FOXL1Q12952 345 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 HNRNPA0Q13151 305 aaKnown RBP5□□□□□ -1.61
TRAPPC13-203ENST00000415825 TOP3AQ13472 1001 aaPredicted RBP5□□□□□ -1.61
TRAPPC13-203ENST00000415825 FNDC7Q5VTL7 733 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 USP30Q70CQ3 517 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 OTOP3Q7RTS5 596 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 TMPRSS6Q8IU80 811 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 RTKN2Q8IZC4 609 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 KREMEN2Q8NCW0 462 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 ANAPC16Q96DE5 110 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 LGR4Q9BXB1 951 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 SLC2A4RGQ9NR83 387 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 GPR27Q9NS67 375 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 DSEQ9UL01 958 aa5□□□□□ -1.61
TRAPPC13-203ENST00000415825 EPB41L3Q9Y2J2 1087 aaPredicted RBP5□□□□□ -1.61
TRAPPC13-203ENST00000415825 PCSK5Q92824 1860 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 GFRA1P56159 465 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 CYP4F3Q08477 520 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 NFYCQ13952 458 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 CNGB1Q14028 1251 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 NOLC1Q14978 699 aaKnown RBP eCLIP4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 TNNI3KQ59H18 835 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 ZNF627Q7L945 461 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 OTOP2Q7RTS6 562 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 ANKRD35Q8N283 1001 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 TMEM145Q8NBT3 493 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 UHMK1Q8TAS1 419 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 RIOX1Q9H6W3 641 aa4.99□□□□□ -1.61
TRAPPC13-203ENST00000415825 GRK2P25098 689 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 GRK3P35626 688 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 KCNQ1P51787 676 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 KIZQ2M2Z5 673 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 RSPO2Q6UXX9 243 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 SYNE4Q8N205 404 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 MPHOSPH9Q99550 1183 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 KCNJ15Q99712 375 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 EPN3Q9H201 632 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 ZNHIT2Q9UHR6 403 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 FAM184BQ9ULE4 1060 aa4.98□□□□□ -1.61
TRAPPC13-203ENST00000415825 ARNTLO00327 626 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 IL18BPO95998 194 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 LRCH2Q5VUJ6 765 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 KCTD1Q719H9 257 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 CXXC5Q7LFL8 322 aaKnown RBP4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 FAM178BQ8IXR5 827 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 RBM12BQ8IXT5 1001 aaKnown RBP4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 FAM169BQ8N8A8 192 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 ZDHHC5Q9C0B5 715 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 PDGFDQ9GZP0 370 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 NRDE2Q9H7Z3 1164 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 SLC39A2Q9NP94 309 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 ADARB2Q9NS39 739 aaKnown RBP4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 NPFFR2Q9Y5X5 522 aa4.97□□□□□ -1.61
TRAPPC13-203ENST00000415825 TBX1O43435 398 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 SUSD5O60279 629 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 DDAH1O94760 285 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 GCP02774 474 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 LTFP02788 710 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 CDK4P11802 303 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 COL6A2P12110 1019 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 FBLP22087 321 aaKnown RBP4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 VAMP1P23763 118 aa4.96□□□□□ -1.62
TRAPPC13-203ENST00000415825 IL12RB1P42701 662 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms