RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 HEXIM1O94992 359 aaKnown RBP10.86□□□□□ -0.67
SS18-203ENST00000415083 IPO7O95373 1038 aaKnown RBP10.86□□□□□ -0.67
SS18-203ENST00000415083 TTLL1O95922 423 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 FAM86B2P0C5J1 330 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 CYP3A7P24462 503 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 GUCY2DQ02846 1103 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 PDCLQ13371 301 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 GPBP1Q86WP2 473 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 DDX42Q86XP3 938 aaKnown RBP eCLIP10.86□□□□□ -0.67
SS18-203ENST00000415083 TANGO6Q9C0B7 1094 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 STXBP5LQ9Y2K9 1186 aa10.86□□□□□ -0.67
SS18-203ENST00000415083 ASTN1O14525 1302 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 SLX4Q8IY92 1834 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 AKAP3O75969 853 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 PON1P27169 355 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 SCNN1DP51172 638 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 GUCY2FP51841 1108 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 JAM2P57087 298 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 PPFIA1Q13136 1202 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 TMEM266Q2M3C6 531 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 TDRD12Q587J7 1177 aaKnown RBP10.85□□□□□ -0.67
SS18-203ENST00000415083 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 CDC42EP5Q6NZY7 148 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 C8orf74Q6P047 294 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 EMBQ6PCB8 327 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 CACNA2D4Q7Z3S7 1137 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 USP38Q8NB14 1042 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 SCFD2Q8WU76 684 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 CEP63Q96MT8 703 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 CCDC43Q96MW1 224 aaKnown RBP10.85□□□□□ -0.67
SS18-203ENST00000415083 NR2E1Q9Y466 385 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 FAM170AA1A519 330 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 GNGT1P63211 74 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 EPHA7Q15375 998 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 CDK5RAP3Q96JB5 506 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 CAPS2Q9BXY5 557 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 DHX36Q9H2U1 1008 aaKnown RBP10.85□□□□□ -0.67
SS18-203ENST00000415083 ACBD3Q9H3P7 528 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
SS18-203ENST00000415083 ZNFX1Q9P2E3 1918 aaKnown RBP10.85□□□□□ -0.67
SS18-203ENST00000415083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.84□□□□□ -0.67
SS18-203ENST00000415083 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 CPP00450 1065 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 ITGA4P13612 1032 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 CACNB3P54284 484 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 RAPGEF1Q13905 1077 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 RRP1BQ14684 758 aaKnown RBP10.84□□□□□ -0.67
SS18-203ENST00000415083 CDC37Q16543 378 aaPredicted RBP10.84□□□□□ -0.67
SS18-203ENST00000415083 KIAA0753Q2KHM9 967 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 SLC9C1Q4G0N8 1177 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 MREGQ8N565 214 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 C8orf37Q96NL8 207 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 REEP2Q9BRK0 252 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 GPR88Q9GZN0 384 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 ZNF287Q9HBT7 754 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 KLRG2A4D1S0 409 aaPredicted RBP10.84□□□□□ -0.67
SS18-203ENST00000415083 ZBTB39O15060 712 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 SSBP05455 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
SS18-203ENST00000415083 HOXA10P31260 410 aaPredicted RBP10.84□□□□□ -0.67
SS18-203ENST00000415083 ATP1A2P50993 1020 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 PPARDQ03181 441 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 ADAM9Q13443 819 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 CCDC40Q4G0X9 1142 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 OR2W6PQ8NHA6 318 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 CUL5Q93034 780 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 ALS2CR12Q96Q35 445 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 EML1O00423 815 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 SERPINB2P05120 415 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 UCHL3P15374 230 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 GUCY1A3Q02108 690 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 HERC4Q5GLZ8 1057 aaPredicted RBP10.84□□□□□ -0.67
SS18-203ENST00000415083 UBAP2Q5T6F2 1119 aaKnown RBP10.84□□□□□ -0.67
SS18-203ENST00000415083 DCAF12L1Q5VU92 463 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 ARHGAP27Q6ZUM4 889 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 IFT81Q8WYA0 676 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 RUSC1Q9BVN2 902 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 VAV3Q9UKW4 847 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 TRAF3IP3Q9Y228 551 aa10.84□□□□□ -0.67
SS18-203ENST00000415083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.84□□□□□ -0.67
SS18-203ENST00000415083 DDTLA6NHG4 134 aaPredicted RBP10.83□□□□□ -0.68
SS18-203ENST00000415083 GOLGA8KD6RF30 607 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 TGFB1I1O43294 461 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 NNTQ13423 1086 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 CFAP221Q4G0U5 840 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 ALS2CLQ60I27 953 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 KCNV1Q6PIU1 500 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 SFR1Q86XK3 245 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 LNX1Q8TBB1 728 aaPredicted RBP10.83□□□□□ -0.68
SS18-203ENST00000415083 FIZ1Q96SL8 496 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 SYT11Q9BT88 431 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 ANO3Q9BYT9 981 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 SERPINB13Q9UIV8 391 aa10.83□□□□□ -0.68
SS18-203ENST00000415083 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms