RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 GNL2Q13823 731 aaKnown RBP28.59■■■□□ 2.17
CPNE1-207ENST00000414664 SERINC5Q86VE9 423 aa28.59■■■□□ 2.17
CPNE1-207ENST00000414664 RPUSD2Q8IZ73 545 aaKnown RBP28.59■■■□□ 2.17
CPNE1-207ENST00000414664 FAM20AQ96MK3 541 aa28.59■■■□□ 2.17
CPNE1-207ENST00000414664 FOXP1Q9H334 677 aaPredicted RBP28.59■■■□□ 2.17
CPNE1-207ENST00000414664 IL23AQ9NPF7 189 aa28.59■■■□□ 2.17
CPNE1-207ENST00000414664 TBX3O15119 743 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 MARCH6O60337 910 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 SFNP31947 248 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 RFC2P35250 354 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 RBL2Q08999 1139 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 PPFIA1Q13136 1202 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 HIC1Q14526 733 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 SWSAP1Q6NVH7 229 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 ETNPPLQ8TBG4 499 aa28.58■■■□□ 2.17
CPNE1-207ENST00000414664 KAT6AQ92794 2004 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 FAM205CA6NFA0 338 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 RRN3P2A6NIE6 340 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 TREHO43280 583 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 SLC37A4O43826 429 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 PSMD10O75832 226 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 JAK3P52333 1124 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 EPHB4P54760 987 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 SHHQ15465 462 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 PDXDC2PQ6P474 469 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 RDM1Q8NG50 284 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 LMBR1Q8WVP7 490 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 DHX38Q92620 1227 aaKnown RBP28.57■■■□□ 2.16
CPNE1-207ENST00000414664 SCLYQ96I15 445 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 DISC1Q9NRI5 854 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 SMC3Q9UQE7 1217 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 TRPC6Q9Y210 931 aa28.57■■■□□ 2.16
CPNE1-207ENST00000414664 BAG4O95429 457 aaKnown RBP28.56■■■□□ 2.16
CPNE1-207ENST00000414664 PARNO95453 639 aaKnown RBP28.56■■■□□ 2.16
CPNE1-207ENST00000414664 IQCF3P0C7M6 154 aa28.56■■■□□ 2.16
CPNE1-207ENST00000414664 SELPP16109 830 aa28.56■■■□□ 2.16
CPNE1-207ENST00000414664 ADAM17P78536 824 aa28.56■■■□□ 2.16
CPNE1-207ENST00000414664 PLCB4Q15147 1175 aa28.56■■■□□ 2.16
CPNE1-207ENST00000414664 GRIK4Q16099 956 aa28.56■■■□□ 2.16
CPNE1-207ENST00000414664 PSRC1Q6PGN9 363 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-207ENST00000414664 CCDC60Q8IWA6 550 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-207ENST00000414664 POTEB3A0JP26 581 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 PFKMP08237 780 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 CKBP12277 381 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 GJB2P29033 226 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 LRIT3Q3SXY7 679 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 C9orf50Q5SZB4 431 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 POTEBQ6S5H4 581 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 GJA10Q969M2 543 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 UNC45AQ9H3U1 944 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 KCNMB3Q9NPA1 279 aa28.55■■■□□ 2.16
CPNE1-207ENST00000414664 MAFBQ9Y5Q3 323 aaPredicted RBP28.55■■■□□ 2.16
CPNE1-207ENST00000414664 TRIP12Q14669 1992 aaPredicted RBP28.55■■■□□ 2.16
CPNE1-207ENST00000414664 CHMP2AO43633 222 aa28.54■■■□□ 2.16
CPNE1-207ENST00000414664 HBP1O60381 514 aa28.54■■■□□ 2.16
CPNE1-207ENST00000414664 INSRRP14616 1297 aa28.54■■■□□ 2.16
CPNE1-207ENST00000414664 TRIM71Q2Q1W2 868 aaKnown RBP28.54■■■□□ 2.16
CPNE1-207ENST00000414664 LRRC8DQ7L1W4 858 aa28.54■■■□□ 2.16
CPNE1-207ENST00000414664 MIER3Q7Z3K6 550 aa28.54■■■□□ 2.16
CPNE1-207ENST00000414664 CKAP2LQ8IYA6 745 aa28.54■■■□□ 2.16
CPNE1-207ENST00000414664 SLFN12Q8IYM2 578 aa28.54■■■□□ 2.16
CPNE1-207ENST00000414664 GABBR1Q9UBS5 961 aa28.54■■■□□ 2.16
CPNE1-207ENST00000414664 CAND2O75155 1236 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 FGBP02675 491 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 ACRP10323 421 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 TMEM240Q5SV17 173 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 TAF2Q6P1X5 1199 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 C16orf59Q7L2K0 433 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 ATP8B4Q8TF62 1192 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.53■■■□□ 2.165e-13■■■■■ 64.1
CPNE1-207ENST00000414664 TUBE1Q9UJT0 475 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 TRIOBPQ9H2D6 2365 aa28.53■■■□□ 2.16
CPNE1-207ENST00000414664 THPOP40225 353 aa28.52■■■□□ 2.16
CPNE1-207ENST00000414664 IGBP1P78318 339 aa28.52■■■□□ 2.16
CPNE1-207ENST00000414664 CUL4AQ13619 759 aa28.52■■■□□ 2.16
CPNE1-207ENST00000414664 ZNF365Q70YC5 407 aa28.52■■■□□ 2.16
CPNE1-207ENST00000414664 POTEDQ86YR6 584 aa28.52■■■□□ 2.16
CPNE1-207ENST00000414664 NOSTRINQ8IVI9 506 aa28.52■■■□□ 2.16
CPNE1-207ENST00000414664 RNPC3Q96LT9 517 aaKnown RBP28.52■■■□□ 2.16
CPNE1-207ENST00000414664 MTIF3Q9H2K0 278 aaKnown RBP28.52■■■□□ 2.16
CPNE1-207ENST00000414664 B3GNT9Q6UX72 402 aa28.51■■■□□ 2.15
CPNE1-207ENST00000414664 RSPH3Q86UC2 560 aa28.51■■■□□ 2.15
CPNE1-207ENST00000414664 BBXQ8WY36 941 aaPredicted RBP28.51■■■□□ 2.15
CPNE1-207ENST00000414664 WNT8BQ93098 351 aa28.51■■■□□ 2.15
CPNE1-207ENST00000414664 FAM167AQ96KS9 214 aa28.51■■■□□ 2.15
CPNE1-207ENST00000414664 NOL7Q9UMY1 257 aaKnown RBP28.51■■■□□ 2.15
CPNE1-207ENST00000414664 MBLAC1A4D2B0 266 aaPredicted RBP28.5■■■□□ 2.15
CPNE1-207ENST00000414664 H3BQV1 296 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 NEMFO60524 1076 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 RPLP2P05387 115 aaKnown RBP28.5■■■□□ 2.15
CPNE1-207ENST00000414664 ATP2B1P20020 1258 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 U2AF2P26368 475 aaKnown RBP eCLIP28.5■■■□□ 2.153e-26■□□□□ 9.9
CPNE1-207ENST00000414664 PPP2R5CQ13362 524 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 CALCRLQ16602 461 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 ZNF484Q5JVG2 852 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 ZNF618Q5T7W0 954 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 DEFB128Q7Z7B8 93 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 HAS1Q92839 578 aa28.5■■■□□ 2.15
CPNE1-207ENST00000414664 MYH9P35579 1960 aaKnown RBP28.5■■■□□ 2.15
CPNE1-207ENST00000414664 COL1A2P08123 1366 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms