RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 SESTD1Q86VW0 696 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 GPRASP2Q96D09 838 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 ZNF274Q96GC6 653 aaPredicted RBP9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 RNPC3Q96LT9 517 aaKnown RBP9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 SLC26A6Q9BXS9 759 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 SEZ6LQ9BYH1 1024 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 ZMYND12Q9H0C1 365 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 MLXIPQ9HAP2 919 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 CXXC1Q9P0U4 656 aaPredicted RBP9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 VPS54Q9P1Q0 977 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 TPCN1Q9ULQ1 816 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 GSTTP1A0A1W2PQM5 241 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 LILRB3O75022 631 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 ARP10275 920 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 HOXC8P31273 242 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 AK2P54819 239 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 ANAPC15P60006 121 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 PTPN11Q06124 597 aaPredicted RBP9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 SCRN1Q12765 414 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 ITGB3BPQ13352 177 aaPredicted RBP9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 PPIGQ13427 754 aaKnown RBP eCLIP9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 NEDD9Q14511 834 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 PTGISQ16647 500 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 QPCTQ16769 361 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 TTC13Q8NBP0 860 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 SENP7Q9BQF6 1050 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 MXRA8Q9BRK3 442 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 IL23AQ9NPF7 189 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 TRANK1O15050 2925 aa9.76□□□□□ -0.85
HERPUD2-203ENST00000413517 IGLV3-22A0A075B6J6 115 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 GRXCR1A8MXD5 290 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 FAM86B1E9PN63 330 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 CTDNEP1O95476 244 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 FAM86B2P0C5J1 330 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 CD46P15529 392 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 ST3GAL1Q11201 340 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 AP3B2Q13367 1082 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 MTMR1Q13613 665 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 TCTN1Q2MV58 587 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 UTP14CQ5TAP6 766 aaKnown RBP9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 NLRX1Q86UT6 975 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 REXO1Q8N1G1 1221 aaKnown RBP9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 TMEM199Q8N511 208 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 UIMC1Q96RL1 719 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 PCYT2Q99447 389 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 KIF2CQ99661 725 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 OSBPL7Q9BZF2 842 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 KCNH7Q9NS40 1196 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 GJB4Q9NTQ9 266 aa9.75□□□□□ -0.85
HERPUD2-203ENST00000413517 PRUNE2Q8WUY3 3088 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 H3BRB1 525 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 M0R2N6 131 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 MEIS1O00470 390 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 NOP56O00567 594 aaKnown RBP9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 PFKFB2O60825 505 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 CCNE2O96020 404 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 CYP3A4P08684 503 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 IQCF3P0C7M6 154 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 SUPT20HL2P0C7V6 817 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 SMIM10L2AP0DMW4 78 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 SMIM10L2BP0DMW5 78 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 TCF7P36402 384 aaPredicted RBP9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 ADAM17P78536 824 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 RBL2Q08999 1139 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 MBTPS1Q14703 1052 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 CEP55Q53EZ4 464 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 OTOP2Q7RTS6 562 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 DEFB128Q7Z7B8 93 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 TEX2Q8IWB9 1127 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 DEFB123Q8N688 67 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 C7orf31Q8N865 590 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 NECAB1Q8N987 351 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 HERVK_113Q902F9 699 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 LENG9Q96B70 501 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 KATNAL1Q9BW62 490 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 TTYH1Q9H313 450 aaPredicted RBP9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 RNPEPQ9H4A4 650 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 TUT1Q9H6E5 874 aaKnown RBP9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 VRTNQ9H8Y1 702 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 AGO4Q9HCK5 861 aaKnown RBP9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 C6orf50Q9HD87 102 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 MTMR10Q9NXD2 777 aa9.74□□□□□ -0.85
HERPUD2-203ENST00000413517 CDH23Q9H251 3354 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 REV3LO60673 3130 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 EYSQ5T1H1 3165 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 CARNS1A5YM72 827 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 DHX15O43143 795 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 TREHO43280 583 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 DEXIO95424 95 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 CKBP12277 381 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 FDPSP14324 419 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 PBX2P40425 430 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 SMAD3P84022 425 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 AKAP17AQ02040 695 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms