RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CCT8L2Q96SF2 557 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 MXD3Q9BW11 206 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 HSD3B7Q9H2F3 369 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 DNAJC18Q9H819 358 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 XAB2Q9HCS7 855 aaKnown RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 FAIMQ9NVQ4 179 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 IL20Q9NYY1 176 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 FAM47E-STBD1D6RA91 191 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 RNASEH2AO75792 299 aaKnown RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 CYP1A1P04798 512 aaPredicted RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 KCNA6P17658 529 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 POLR2EP19388 210 aaKnown RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 NR2C2P49116 596 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 EMP3P54852 163 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 NDUFA5Q16718 116 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 MYLK3Q32MK0 819 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 LDLRAD1Q5T700 205 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 SNX30Q5VWJ9 437 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 ZNF572Q7Z3I7 529 aaPredicted RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 SNX32Q86XE0 403 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 EPS8L3Q8TE67 593 aaKnown RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 HERVK_113Q902F9 699 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 SNF8Q96H20 258 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 SLF1Q9BQI6 1058 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 TIPINQ9BVW5 301 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 DNAI2Q9GZS0 605 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 CCDC177Q9NQR7 707 aaPredicted RBP5.68□□□□□ -1.5
HERC4-205ENST00000412272 STK32BQ9NY57 414 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 DLGAP2Q9P1A6 1054 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 STAG3Q9UJ98 1225 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 RASAL2Q9UJF2 1139 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 FBXL5Q9UKA1 691 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 CFL2Q9Y281 166 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 CARMIL2Q6F5E8 1435 aa5.68□□□□□ -1.5
HERC4-205ENST00000412272 TULP4Q9NRJ4 1543 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 ARPC4-TTLL3A0A0A6YYG9 625 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 KMOO15229 486 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 RASA4O43374 803 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 KATNA1O75449 491 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 ATP6V1C1P21283 382 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 NIPAL4Q0D2K0 466 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 GNA13Q14344 377 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 NR1D2Q14995 579 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 CDONQ4KMG0 1287 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 KDM7AQ6ZMT4 941 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 VPS36Q86VN1 386 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 NLRP14Q86W24 1093 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 CCDC83Q8IWF9 413 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 TOR1AIP2Q8NFQ8 470 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 RBM14Q96PK6 669 aaKnown RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 PPP1R10Q96QC0 940 aaKnown RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 ALPK1Q96QP1 1244 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 PARVBQ9HBI1 364 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.67□□□□□ -1.53e-7■■■□□ 16.3
HERC4-205ENST00000412272 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.67□□□□□ -1.54e-7■□□□□ 10.5
HERC4-205ENST00000412272 LZTS1Q9Y250 596 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 ZNF711Q9Y462 761 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 NFE2L3Q9Y4A8 694 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 SNX9Q9Y5X1 595 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 COMMD3-BMI1R4GMX3 469 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 A0A1W2PQ27 194 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 A0A1W2PQ64 194 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 A0A1W2PQD8 194 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 C5orf60A6NFR6 353 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 NOTOA8MTQ0 251 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 ADAM23O75077 832 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 OLFM2O95897 454 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 FAM107AO95990 144 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 CTRB1P17538 263 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 PTPN2P17706 415 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 RXRGP48443 463 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 MTHFSP49914 203 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 GJA9P57773 515 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 AMPD2Q01433 879 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 APBA1Q02410 837 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 MRPL28Q13084 256 aaKnown RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 CTC1Q2NKJ3 1217 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 EAPPQ56P03 285 aaPredicted RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 IGSF11Q5DX21 431 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 CTRB2Q6GPI1 263 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 DBX2Q6ZNG2 339 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 FASTKD5Q7L8L6 764 aaKnown RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 CD302Q8IX05 232 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 PDCD7Q8N8D1 485 aaKnown RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 DIS3LQ8TF46 1054 aaKnown RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 CCT6BQ92526 530 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 HEPHQ9BQS7 1158 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 SPATA16Q9BXB7 569 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 FANCFQ9NPI8 374 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 STIM2Q9P246 746 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 PDP2Q9P2J9 529 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 MOSPD1Q9UJG1 213 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 TELO2Q9Y4R8 837 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 NUMBLQ9Y6R0 609 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 ANKRD34BA5PLL1 514 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 GNAT3A8MTJ3 354 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 PSMD14O00487 310 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 STRNO43815 780 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 STAMBPO95630 424 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms