RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 GPR155Q7Z3F1 870 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 PTRH1Q86Y79 214 aaKnown RBP3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 TTC9BQ8N6N2 239 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 FBXW5Q969U6 566 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 NBPF4Q96M43 638 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 IPO9Q96P70 1041 aaKnown RBP3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 TACO1Q9BSH4 297 aaKnown RBP3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 C1QTNF3Q9BXJ4 246 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 RIC8BQ9NVN3 520 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 SIRPGQ9P1W8 387 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 CBLCQ9ULV8 474 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 SRPK3Q9UPE1 567 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 PTPN22Q9Y2R2 807 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 PCDHA9Q9Y5H5 950 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 KDM2BQ8NHM5 1336 aa3.16□□□□□ -1.9
RNU2-54P-201ENST00000410299 ARVCFO00192 962 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 WNT9AO14904 365 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 MATN3O15232 486 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 CNOT4O95628 575 aaKnown RBP3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 CHGBP05060 677 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 TNFRSF1AP19438 455 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 CSF2RBP32927 897 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 DNM2P50570 870 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 JAM2P57087 298 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 SERINC3Q13530 473 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 RASA3Q14644 834 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 CDSNQ15517 529 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 GPR19Q15760 415 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 SLFN13Q68D06 897 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 RALYLQ86SE5 291 aaKnown RBP3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 CIR1Q86X95 450 aaPredicted RBP3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 DNERQ8NFT8 737 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 DVL3Q92997 716 aaPredicted RBP3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 AJUBAQ96IF1 538 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 DEPDC7Q96QD5 511 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 DHRS4Q9BTZ2 278 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 HIRIP3Q9BW71 556 aaPredicted RBP3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 KLC2Q9H0B6 622 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 MEGF9Q9H1U4 602 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 CD248Q9HCU0 757 aa3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 MRPS23Q9Y3D9 190 aaKnown RBP3.15□□□□□ -1.91
RNU2-54P-201ENST00000410299 ESYT3A0FGR9 886 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 CCDC66A2RUB6 948 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 C1QTNF3-AMACRE9PGA6 284 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 H0Y858 1186 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 SUV39H1O43463 412 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 ZNF888P0CJ79 500 aaPredicted RBP3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 GABREP78334 506 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 ST5P78524 1137 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 SEC23AQ15436 765 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 CRY1Q16526 586 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 ZNF585AQ6P3V2 769 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 EP400NLQ6ZTU2 488 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 C16orf59Q7L2K0 433 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 SPRED1Q7Z699 444 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 ZC3H7AQ8IWR0 971 aaKnown RBP3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 NLGN4XQ8N0W4 816 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 SH3RF3Q8TEJ3 882 aaPredicted RBP3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 KISS1RQ969F8 398 aaPredicted RBP3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 WWC2-AS2Q96NR7 200 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 GNRHR2Q96P88 292 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 LRRC37BQ96QE4 947 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 DNAJC7Q99615 494 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 KATNBL1Q9H079 304 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 SLC52A2Q9HAB3 445 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 SMURF1Q9HCE7 757 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 SNTG2Q9NY99 539 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 ARHGAP28Q9P2N2 729 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 NDOR1Q9UHB4 597 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 ATP23Q9Y6H3 246 aa3.14□□□□□ -1.91
RNU2-54P-201ENST00000410299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 PRAMEF25A6NGN4 478 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 PATE3B3GLJ2 98 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 ZNF561-AS1K7EIQ3 104 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 FOXS1O43638 330 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 RASGRP1O95267 797 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 C4BPAP04003 597 aaKnown RBP3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 POLD1P28340 1107 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 MC4RP32245 332 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 ZXDAP98168 799 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 RBL2Q08999 1139 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 USP10Q14694 798 aaKnown RBP3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 NOLC1Q14978 699 aaKnown RBP eCLIP3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 FAM47CQ5HY64 1035 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 FIGNQ5HY92 759 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 FSTL4Q6MZW2 842 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 PALM2Q8IXS6 379 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 CISD2Q8N5K1 135 aaKnown RBP3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 SLC7A14Q8TBB6 771 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 C8orf37Q96NL8 207 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 LMF1Q96S06 567 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 DEF6Q9H4E7 631 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 BTBD7Q9P203 1132 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 COQ6Q9Y2Z9 468 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 TSC22D4Q9Y3Q8 395 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 SLC4A7Q9Y6M7 1214 aa3.13□□□□□ -1.91
RNU2-54P-201ENST00000410299 GSTA4O15217 222 aa3.12□□□□□ -1.91
RNU2-54P-201ENST00000410299 ZNF623O75123 536 aa3.12□□□□□ -1.91
RNU2-54P-201ENST00000410299 MMEP08473 750 aa3.12□□□□□ -1.91
RNU2-54P-201ENST00000410299 NAT1P18440 290 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms