RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 SEPT2Q15019 361 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 GPATCH4Q5T3I0 446 aaKnown RBP12.35□□□□□ -0.43
ITGA6-203ENST00000409532 BCAS4Q8TDM0 211 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 AP1M1Q9BXS5 423 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 CAPS2Q9BXY5 557 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 DHX36Q9H2U1 1008 aaKnown RBP12.35□□□□□ -0.43
ITGA6-203ENST00000409532 KCTD10Q9H3F6 313 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 PCDHA2Q9Y5H9 948 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 CHMP2AO43633 222 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 PPFIA4O75335 1185 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 TTMPQ5BVD1 217 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 KSR1Q8IVT5 923 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 PIGOQ8TEQ8 1089 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 KDM3AQ9Y4C1 1321 aa12.35□□□□□ -0.43
ITGA6-203ENST00000409532 CEP104O60308 925 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 UBXN2AP68543 259 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 ARHGAP4P98171 946 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 NAB2Q15742 525 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 DDX42Q86XP3 938 aaKnown RBP eCLIP12.34□□□□□ -0.43
ITGA6-203ENST00000409532 DNAJC18Q9H819 358 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 ARMCX3Q9UH62 379 aaPredicted RBP12.34□□□□□ -0.43
ITGA6-203ENST00000409532 BCS1LQ9Y276 419 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 ABCB11O95342 1321 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 GRID2IPA4D2P6 1211 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 DDTLA6NHG4 134 aaPredicted RBP12.34□□□□□ -0.43
ITGA6-203ENST00000409532 ZNF571Q7Z3V5 609 aaPredicted RBP12.34□□□□□ -0.43
ITGA6-203ENST00000409532 TAF4BQ92750 862 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 LUC7LQ9NQ29 371 aaKnown RBP12.34□□□□□ -0.43
ITGA6-203ENST00000409532 ZBTB39O15060 712 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 GCNT3O95395 438 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 ZNF76P36508 570 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 CFAP58Q5T655 872 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 TRMT1LQ7Z2T5 733 aaKnown RBP12.34□□□□□ -0.43
ITGA6-203ENST00000409532 IFT20Q8IY31 132 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 RNF10Q8N5U6 811 aaKnown RBP12.34□□□□□ -0.43
ITGA6-203ENST00000409532 CEP63Q96MT8 703 aa12.34□□□□□ -0.43
ITGA6-203ENST00000409532 FAM86B1E9PN63 330 aa12.33□□□□□ -0.43
ITGA6-203ENST00000409532 FAM86B2P0C5J1 330 aa12.33□□□□□ -0.43
ITGA6-203ENST00000409532 GCFC2P16383 781 aaKnown RBP12.33□□□□□ -0.43
ITGA6-203ENST00000409532 CERKLQ49MI3 558 aaPredicted RBP12.33□□□□□ -0.43
ITGA6-203ENST00000409532 APOBEC3HQ6NTF7 200 aaKnown RBP12.33□□□□□ -0.43
ITGA6-203ENST00000409532 CERKQ8TCT0 537 aa12.33□□□□□ -0.43
ITGA6-203ENST00000409532 CASKIN2Q8WXE0 1202 aa12.33□□□□□ -0.43
ITGA6-203ENST00000409532 TEKT1Q969V4 418 aa12.33□□□□□ -0.43
ITGA6-203ENST00000409532 AJAP1Q9UKB5 411 aaPredicted RBP12.33□□□□□ -0.43
ITGA6-203ENST00000409532 DNM3Q9UQ16 869 aa12.33□□□□□ -0.43
ITGA6-203ENST00000409532 ATF5Q9Y2D1 282 aaPredicted RBP12.33□□□□□ -0.43
ITGA6-203ENST00000409532 MEIS2O14770 477 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 RAD51CO43502 376 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 AKAP3O75969 853 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 UCHL3P15374 230 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 POLD1P28340 1107 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 SLC12A3P55017 1021 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 GIT2Q14161 759 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 EXOC3L4Q17RC7 722 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 MAATS1Q7Z4T9 603 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 OPA1O60313 960 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 NNTQ13423 1086 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 RPS6KA1Q15418 735 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 EMBQ6PCB8 327 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 FAM107BQ9H098 131 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 GANQ9H2C0 597 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 PODXL2Q9NZ53 605 aa12.33□□□□□ -0.44
ITGA6-203ENST00000409532 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 XRCC5P13010 732 aaKnown RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 PPFIA1Q13136 1202 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 CTTNQ14247 550 aaKnown RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 PLS1Q14651 629 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 MEI1Q5TIA1 1274 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 ALKBH5Q6P6C2 394 aaKnown RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 ADAT2Q7Z6V5 191 aaKnown RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 EDEM3Q9BZQ6 932 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 COA1Q9GZY4 146 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 KCNMB3Q9NPA1 279 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 SWAP70Q9UH65 585 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 GNA14O95837 355 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 HOXD13P35453 343 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 KNOP1Q1ED39 458 aaKnown RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 RDH13Q8NBN7 331 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 OR2W6PQ8NHA6 318 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 RUSC1Q9BVN2 902 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 NUCKS1Q9H1E3 243 aaKnown RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 MYH4Q9Y623 1939 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 GFPT2O94808 682 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 SPATA31C1P0DKV0 1188 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 PON1P27169 355 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 HPDP32754 393 aaPredicted RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 CRKP46108 304 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 ICA1Q05084 483 aa12.32□□□□□ -0.44
ITGA6-203ENST00000409532 ITIH3Q06033 890 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms