RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 THNSL1Q8IYQ7 743 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 RSRC1Q96IZ7 334 aaKnown RBP27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 VPS72Q15906 364 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 FDX1P10109 184 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 CIITAP33076 1130 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 RASSF2P50749 326 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 MAPK6Q16659 721 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 INHBAP08476 426 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 FCER1AP12319 257 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 C10orf76Q5T2E6 689 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 FASTKD5Q7L8L6 764 aaKnown RBP27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 POTEDQ86YR6 584 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 ZNF667Q5HYK9 610 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 ARHGEF18Q6ZSZ5 1173 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 PIGOQ8TEQ8 1089 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 HDAC11Q96DB2 347 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 ZNF302Q9NR11 478 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 GOLGA8KD6RF30 607 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 INPP5BP32019 993 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 ARHGAP4P98171 946 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 ANGPTL3Q9Y5C1 460 aa27.09■■□□□ 1.93
SPIRE1-202ENST00000409402 DENND3A2RUS2 1198 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 ARHGAP25P42331 645 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 RESTQ13127 1097 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 RAB44Q7Z6P3 723 aaPredicted RBP27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 BANK1Q8NDB2 785 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 PARD3BQ8TEW8 1205 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 HERC5Q9UII4 1024 aaKnown RBP27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 SUGT1Q9Y2Z0 365 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 WDR46O15213 610 aaKnown RBP27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 SGO2Q562F6 1265 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 RAPH1Q70E73 1250 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 DNAAF3Q8N9W5 541 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 PRPF38AQ8NAV1 312 aaKnown RBP27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 GLI2P10070 1586 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 OAS2P29728 719 aaKnown RBP27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 RBBP5Q15291 538 aaKnown RBP27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 ENOX1Q8TC92 643 aaKnown RBP27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 CALN1Q9BXU9 219 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 ACAD9Q9H845 621 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 LMCD1Q9NZU5 365 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 ADGRB3O60242 1522 aa27.08■■□□□ 1.93
SPIRE1-202ENST00000409402 CLDN3O15551 220 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 SFNP31947 248 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 FAM20AQ96MK3 541 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 KIAA1586Q9HCI6 787 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 KLHL14Q9P2G3 628 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 GRM4Q14833 912 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 SLC44A5Q8NCS7 719 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 TWF2Q6IBS0 349 aaKnown RBP27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 DARS2Q6PI48 645 aaKnown RBP27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 STK36Q9NRP7 1315 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 ERCC6L2Q5T890 1561 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 BUB1BO60566 1050 aaPredicted RBP27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 CPP00450 1065 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 UHMK1Q8TAS1 419 aaKnown RBP27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 EFCAB8A8MWE9 144 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 SERPING1P05155 500 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 NEK9Q8TD19 979 aa27.07■■□□□ 1.92
SPIRE1-202ENST00000409402 SFI1A8K8P3 1242 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 SLITRK6Q9H5Y7 841 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 FAM114A2Q9NRY5 505 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 INPP5FQ9Y2H2 1132 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L15C9J2P7 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L13C9JLJ4 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L11C9JVI0 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L18D6R9N7 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L22D6RA61 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L17D6RBQ6 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L19D6RCP7 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L20D6RJB6 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L24Q0WX57 530 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 USP17L6PQ6QN14 398 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 WDR19Q8NEZ3 1342 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 CLTCL1P53675 1640 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 RCAN1P53805 252 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 DYNLT1P63172 113 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 GUCY2DQ02846 1103 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 MTRQ99707 1265 aa27.06■■□□□ 1.92
SPIRE1-202ENST00000409402 F5H6K3 240 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 KLRC3Q07444 240 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 SF3A3Q12874 501 aaKnown RBP eCLIP27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 PADI6Q6TGC4 694 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 URGCPQ8TCY9 931 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 UBN1Q9NPG3 1134 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 LARGE1O95461 756 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 SLC4A1P02730 911 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 ELMOD1Q8N336 334 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 C11orf57Q6ZUT1 292 aaPredicted RBP27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 MTA3Q9BTC8 594 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 NDST4Q9H3R1 872 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 SMYD2Q9NRG4 433 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 ZNRF3Q9ULT6 936 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 JRKLQ9Y4A0 524 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 CHRNA5P30532 468 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 EPHB1P54762 984 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 ENAHQ8N8S7 591 aaPredicted RBP27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 PCK1P35558 622 aa27.05■■□□□ 1.92
SPIRE1-202ENST00000409402 ZBED6P86452 979 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms