RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 KCNMB3Q9NPA1 279 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 KIF3AQ9Y496 699 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 PCDHA10Q9Y5I2 948 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 MARK3P27448 753 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 TRIM71Q2Q1W2 868 aaKnown RBP21.71■■□□□ 1.07
RTN4-207ENST00000402434 B3GNT9Q6UX72 402 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 CCDC60Q8IWA6 550 aaPredicted RBP21.71■■□□□ 1.07
RTN4-207ENST00000402434 CCDC155Q8N6L0 562 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 GJA10Q969M2 543 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 TCEAL9Q9UHQ7 104 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 KAT6AQ92794 2004 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 TBX3O15119 743 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 TREHO43280 583 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 IQCF3P0C7M6 154 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 SHHQ15465 462 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 SWSAP1Q6NVH7 229 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 RETREG2Q8NC44 543 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 LMBR1Q8WVP7 490 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 VWCEQ96DN2 955 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 FAM20AQ96MK3 541 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 TEKT3Q9BXF9 490 aa21.71■■□□□ 1.07
RTN4-207ENST00000402434 MAFBQ9Y5Q3 323 aaPredicted RBP21.71■■□□□ 1.07
RTN4-207ENST00000402434 LAMA3Q16787 3333 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 WDR64B1ANS9 1081 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 BACH1O14867 736 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 PSAPP07602 524 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 CUL4AQ13619 759 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 PLCB4Q15147 1175 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 LRIT3Q3SXY7 679 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 C9orf50Q5SZB4 431 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 FAM160B1Q5W0V3 765 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 HAS1Q92839 578 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 TNPO1Q92973 898 aaKnown RBP21.7■■□□□ 1.06
RTN4-207ENST00000402434 WNT8BQ93098 351 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 IL23AQ9NPF7 189 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 ZNF302Q9NR11 478 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 DISC1Q9NRI5 854 aa21.7■■□□□ 1.06
RTN4-207ENST00000402434 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.7■■□□□ 1.06
RTN4-207ENST00000402434 CKBP12277 381 aa21.69■■□□□ 1.06
RTN4-207ENST00000402434 SFNP31947 248 aa21.69■■□□□ 1.06
RTN4-207ENST00000402434 PPFIA1Q13136 1202 aa21.69■■□□□ 1.06
RTN4-207ENST00000402434 RDM1Q8NG50 284 aa21.69■■□□□ 1.06
RTN4-207ENST00000402434 SCLYQ96I15 445 aa21.69■■□□□ 1.06
RTN4-207ENST00000402434 UNC45AQ9H3U1 944 aa21.69■■□□□ 1.06
RTN4-207ENST00000402434 SAMM50Q9Y512 469 aa21.69■■□□□ 1.06
RTN4-207ENST00000402434 POTEB3A0JP26 581 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 MBLAC1A4D2B0 266 aaPredicted RBP21.68■■□□□ 1.06
RTN4-207ENST00000402434 RRN3P2A6NIE6 340 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 INSRRP14616 1297 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 SELPP16109 830 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 ATP4AP20648 1035 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 U2AF2P26368 475 aaKnown RBP eCLIP21.68■■□□□ 1.067e-8■■□□□ 13
RTN4-207ENST00000402434 GJB2P29033 226 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 RFC2P35250 354 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 JAK3P52333 1124 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 GRIK4Q16099 956 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 TMEM240Q5SV17 173 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 MARCH8Q5T0T0 291 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 PDXDC2PQ6P474 469 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 POTEBQ6S5H4 581 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 NOSTRINQ8IVI9 506 aa21.68■■□□□ 1.06
RTN4-207ENST00000402434 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.68■■□□□ 1.067e-8■■□□□ 13.4
RTN4-207ENST00000402434 WNT7AO00755 349 aa21.67■■□□□ 1.06
RTN4-207ENST00000402434 PPP2R5CQ13362 524 aa21.67■■□□□ 1.06
RTN4-207ENST00000402434 TRAF7Q6Q0C0 670 aa21.67■■□□□ 1.06
RTN4-207ENST00000402434 POTEDQ86YR6 584 aa21.67■■□□□ 1.06
RTN4-207ENST00000402434 RPUSD2Q8IZ73 545 aaKnown RBP21.67■■□□□ 1.06
RTN4-207ENST00000402434 ATP8B4Q8TF62 1192 aa21.67■■□□□ 1.06
RTN4-207ENST00000402434 SMC3Q9UQE7 1217 aa21.67■■□□□ 1.06
RTN4-207ENST00000402434 MYH9P35579 1960 aaKnown RBP21.66■■□□□ 1.06
RTN4-207ENST00000402434 HBP1O60381 514 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 PARNO95453 639 aaKnown RBP21.66■■□□□ 1.06
RTN4-207ENST00000402434 ACRP10323 421 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 FXR1P51114 621 aaKnown RBP eCLIP21.66■■□□□ 1.069e-8■■■■□ 20
RTN4-207ENST00000402434 PSRC1Q6PGN9 363 aaPredicted RBP21.66■■□□□ 1.06
RTN4-207ENST00000402434 ZNF365Q70YC5 407 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 LRRC8DQ7L1W4 858 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 RPAINQ86UA6 219 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 SLFN12Q8IYM2 578 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 GABBR1Q9UBS5 961 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 TUBE1Q9UJT0 475 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 VAV3Q9UKW4 847 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 TRPC6Q9Y210 931 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 IGSF9BQ9UPX0 1349 aa21.66■■□□□ 1.06
RTN4-207ENST00000402434 KIF28PB7ZC32 967 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 CHMP2AO43633 222 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 CAND2O75155 1236 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 PFKMP08237 780 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 GPNMBQ14956 572 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 ZNF618Q5T7W0 954 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 TAF2Q6P1X5 1199 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 MIER3Q7Z3K6 550 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 WDR81Q562E7 1941 aa21.65■■□□□ 1.06
RTN4-207ENST00000402434 THPOP40225 353 aa21.64■■□□□ 1.06
RTN4-207ENST00000402434 GNL2Q13823 731 aaKnown RBP21.64■■□□□ 1.06
RTN4-207ENST00000402434 RASIP1Q5U651 963 aa21.64■■□□□ 1.06
RTN4-207ENST00000402434 BBXQ8WY36 941 aaPredicted RBP21.64■■□□□ 1.06
RTN4-207ENST00000402434 SNX21Q969T3 373 aa21.64■■□□□ 1.06
RTN4-207ENST00000402434 TANC1Q9C0D5 1861 aa21.64■■□□□ 1.06
RTN4-207ENST00000402434 SCN5AQ14524 2016 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms