RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 SART3Q15020 963 aaKnown RBP16.75■□□□□ 0.27
VAMP1-203ENST00000400911 TSHZ1Q6ZSZ6 1077 aa16.75■□□□□ 0.27
VAMP1-203ENST00000400911 RTN4RL1Q86UN2 441 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-203ENST00000400911 NCOA7Q8NI08 942 aa16.75■□□□□ 0.27
VAMP1-203ENST00000400911 IGDCC4Q8TDY8 1250 aa16.75■□□□□ 0.27
VAMP1-203ENST00000400911 LINC01599Q8WXQ3 324 aa16.75■□□□□ 0.27
VAMP1-203ENST00000400911 RRP36Q96EU6 259 aaKnown RBP16.75■□□□□ 0.27
VAMP1-203ENST00000400911 PKD2L1Q9P0L9 805 aa16.75■□□□□ 0.27
VAMP1-203ENST00000400911 CD207Q9UJ71 328 aa16.75■□□□□ 0.27
VAMP1-203ENST00000400911 MRPL42Q9Y6G3 142 aaKnown RBP16.75■□□□□ 0.27
VAMP1-203ENST00000400911 ITGB5P18084 799 aa16.74■□□□□ 0.27
VAMP1-203ENST00000400911 CD52P31358 61 aa16.74■□□□□ 0.27
VAMP1-203ENST00000400911 NDUFV1P49821 464 aa16.74■□□□□ 0.27
VAMP1-203ENST00000400911 ANTXR2P58335 489 aa16.74■□□□□ 0.27
VAMP1-203ENST00000400911 MRPS6P82932 125 aaKnown RBP16.74■□□□□ 0.27
VAMP1-203ENST00000400911 GPRASP2Q96D09 838 aa16.74■□□□□ 0.27
VAMP1-203ENST00000400911 MYL10Q9BUA6 226 aa16.74■□□□□ 0.27
VAMP1-203ENST00000400911 SPZ1Q9BXG8 430 aa16.74■□□□□ 0.27
VAMP1-203ENST00000400911 SMARCAD1Q9H4L7 1026 aa16.74■□□□□ 0.27
VAMP1-203ENST00000400911 ITGB1P05556 798 aa16.73■□□□□ 0.27
VAMP1-203ENST00000400911 GSPT1P15170 499 aaKnown RBP16.73■□□□□ 0.27
VAMP1-203ENST00000400911 CRIPAKQ8N1N5 446 aa16.73■□□□□ 0.27
VAMP1-203ENST00000400911 SPPL3Q8TCT6 385 aa16.73■□□□□ 0.27
VAMP1-203ENST00000400911 EDAQ92838 391 aa16.73■□□□□ 0.27
VAMP1-203ENST00000400911 CDHR1Q96JP9 859 aa16.73■□□□□ 0.27
VAMP1-203ENST00000400911 MSLNLQ96KJ4 702 aa16.73■□□□□ 0.27
VAMP1-203ENST00000400911 FAM49AQ9H0Q0 323 aaPredicted RBP16.73■□□□□ 0.27
VAMP1-203ENST00000400911 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
VAMP1-203ENST00000400911 SEC63Q9UGP8 760 aaKnown RBP16.73■□□□□ 0.27
VAMP1-203ENST00000400911 MICAL3Q7RTP6 2002 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 EYA4O95677 639 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 INSRRP14616 1297 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 TMEM62Q0P6H9 643 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 MTMR1Q13613 665 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 PAN2Q504Q3 1202 aaKnown RBP16.72■□□□□ 0.27
VAMP1-203ENST00000400911 IER5Q5VY09 327 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 ADGRD2Q7Z7M1 963 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 ZNF654Q8IZM8 581 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 CMTR1Q8N1G2 835 aaKnown RBP16.72■□□□□ 0.27
VAMP1-203ENST00000400911 KLHL23Q8NBE8 558 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 CTCFLQ8NI51 663 aaPredicted RBP16.72■□□□□ 0.27
VAMP1-203ENST00000400911 P2RX5Q93086 422 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 MAP3K14Q99558 947 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 CLEC1BQ9P126 229 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 UBIAD1Q9Y5Z9 338 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 LAMA4Q16363 1823 aa16.72■□□□□ 0.27
VAMP1-203ENST00000400911 MYH7BA7E2Y1 1941 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 RRN3P2A6NIE6 340 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 KIF5BP33176 963 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 NAALADL2Q58DX5 795 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 RBM23Q86U06 439 aaKnown RBP16.71■□□□□ 0.27
VAMP1-203ENST00000400911 NPAS4Q8IUM7 802 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 MB21D2Q8IYB1 491 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-203ENST00000400911 CMTR2Q8IYT2 770 aaKnown RBP16.71■□□□□ 0.27
VAMP1-203ENST00000400911 SRBD1Q8N5C6 995 aaKnown RBP16.71■□□□□ 0.27
VAMP1-203ENST00000400911 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 POF1BQ8WVV4 589 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 PPP2R3CQ969Q6 453 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 PCYT2Q99447 389 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 LZTS2Q9BRK4 669 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 FTHL17Q9BXU8 183 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 LY9Q9HBG7 655 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 PADI3Q9ULW8 664 aa16.71■□□□□ 0.27
VAMP1-203ENST00000400911 PPFIA3O75145 1194 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 DDAH1O94760 285 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 CHMLP26374 656 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 PDE4AP27815 886 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 NRIP1P48552 1158 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 GATMP50440 423 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 UBE2SQ16763 222 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 IER5LQ5T953 404 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 EFHBQ8N7U6 833 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 TRAPPC12Q8WVT3 735 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 PHOX2BQ99453 314 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 PCDHGC5Q9Y5F6 944 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 TRPV2Q9Y5S1 764 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 SQORQ9Y6N5 450 aa16.7■□□□□ 0.26
VAMP1-203ENST00000400911 USP34Q70CQ2 3546 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 hCG_1642624A0A1W2PR95 340 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 TMEM221A6NGB7 291 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 M0R296 226 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 STAG3L1P0CL83 205 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 IBSPP21815 317 aaPredicted RBP16.69■□□□□ 0.26
VAMP1-203ENST00000400911 COASYQ13057 564 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 PAK2Q13177 524 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 TRIM67Q6ZTA4 783 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 SMRP1Q8NCR6 262 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 PBXIP1Q96AQ6 731 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 JPH1Q9HDC5 661 aaPredicted RBP16.69■□□□□ 0.26
VAMP1-203ENST00000400911 PCDHA6Q9UN73 950 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 PCDHA8Q9Y5H6 950 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 PCDHA2Q9Y5H9 948 aa16.69■□□□□ 0.26
VAMP1-203ENST00000400911 SPDYE3A6NKU9 549 aa16.68■□□□□ 0.26
VAMP1-203ENST00000400911 LOC730098B7Z3J9 87 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms