RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 TMEM179Q6ZVK1 233 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 WHAMMQ8TF30 809 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 STRBPQ96SI9 672 aaKnown RBP19.96■□□□□ 0.79
USP25-204ENST00000400183 NPR1P16066 1061 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 AP3B2Q13367 1082 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 ALKBH5Q6P6C2 394 aaKnown RBP19.96■□□□□ 0.79
USP25-204ENST00000400183 PCGF5Q86SE9 256 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 SPDL1Q96EA4 605 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 RPF1Q9H9Y2 349 aaKnown RBP19.96■□□□□ 0.79
USP25-204ENST00000400183 CYP27A1Q02318 531 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 PIGBQ92521 554 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 GCC2Q8IWJ2 1684 aa19.96■□□□□ 0.79
USP25-204ENST00000400183 H7C1W4 665 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 ZNF521Q96K83 1311 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 CASP2P42575 452 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 SUSD4Q5VX71 490 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 MIGA2Q7L4E1 593 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 HOXA13P31271 388 aaPredicted RBP19.95■□□□□ 0.78
USP25-204ENST00000400183 CTTNQ14247 550 aaKnown RBP19.95■□□□□ 0.78
USP25-204ENST00000400183 RHOT2Q8IXI1 618 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 NUDCD1Q96RS6 583 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 RASGRF2O14827 1237 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 KCNQ4P56696 695 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 FBXO38Q6PIJ6 1188 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 MSTO1Q9BUK6 570 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 MID2Q9UJV3 735 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 PPP1R9AQ9ULJ8 1098 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 NPHP4O75161 1426 aaPredicted RBP19.95■□□□□ 0.78
USP25-204ENST00000400183 EXOC1LA0A1B0GW35 172 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 KRT31Q15323 416 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 CLEC4GQ6UXB4 293 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 RPAINQ86UA6 219 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 MB21D1Q8N884 522 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 CHMP6Q96FZ7 201 aa19.95■□□□□ 0.78
USP25-204ENST00000400183 HEXIM2Q96MH2 286 aaKnown RBP19.95■□□□□ 0.78
USP25-204ENST00000400183 DR1Q01658 176 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 FMO2Q99518 471 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 IREB2P48200 963 aaKnown RBP19.94■□□□□ 0.78
USP25-204ENST00000400183 HNRNPH2P55795 449 aaKnown RBP19.94■□□□□ 0.78
USP25-204ENST00000400183 TERF2Q15554 542 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 CIAPIN1Q6FI81 312 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 PDIK1LQ8N165 341 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 SCINQ9Y6U3 715 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 PLEKHA8P1O95397 391 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 EIF3BP55884 814 aaKnown RBP19.94■□□□□ 0.78
USP25-204ENST00000400183 SIRT2Q8IXJ6 389 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 ADAMTS1Q9UHI8 967 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 ASNSP08243 561 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 SLCO1A2P46721 670 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 RWDD2BP57060 319 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 BBS9Q3SYG4 887 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 KRT27Q7Z3Y8 459 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 RNF139Q8WU17 664 aa19.94■□□□□ 0.78
USP25-204ENST00000400183 PPWD1Q96BP3 646 aaKnown RBP19.94■□□□□ 0.78
USP25-204ENST00000400183 RASIP1Q5U651 963 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 SYNMO15061 1565 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 PPFIA2O75334 1257 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 ZBED1O96006 694 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 LDHAP00338 332 aaKnown RBP19.93■□□□□ 0.78
USP25-204ENST00000400183 SRGAP2CP0DJJ0 459 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 PEX19P40855 299 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 NNTQ13423 1086 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 TMED8Q6PL24 325 aaPredicted RBP19.93■□□□□ 0.78
USP25-204ENST00000400183 KLHL29Q96CT2 875 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 PARD6BQ9BYG5 372 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 PPME1Q9Y570 386 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 SAMD9Q5K651 1589 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 GOLGA8IPA6NC78 632 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 GOLGA8JA6NMD2 632 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 MCAMP43121 646 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 ANKRD20A4Q4UJ75 823 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 ANKRD20A8PQ5CZ79 823 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 ANKRD20A2Q5SQ80 823 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 RC3H1Q5TC82 1133 aaKnown RBP19.93■□□□□ 0.78
USP25-204ENST00000400183 ANKRD20A1Q5TYW2 823 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 ALS2CLQ60I27 953 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 PDCD7Q8N8D1 485 aaKnown RBP19.93■□□□□ 0.78
USP25-204ENST00000400183 SRP68Q9UHB9 627 aaKnown RBP19.93■□□□□ 0.78
USP25-204ENST00000400183 TBK1Q9UHD2 729 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 ARHGEF5Q12774 1597 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 SLC4A1P02730 911 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 HSP90AA5PQ58FG0 334 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 SPOPLQ6IQ16 392 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 RTKN2Q8IZC4 609 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 EFHD1Q9BUP0 239 aa19.93■□□□□ 0.78
USP25-204ENST00000400183 FRMD3A2A2Y4 597 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 SPECC1L-ADORA2AF8WAN1 911 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 TTI1O43156 1089 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 TRIP13Q15645 432 aaPredicted RBP19.92■□□□□ 0.78
USP25-204ENST00000400183 ERICH1Q86X53 443 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 DCAF4Q8WV16 495 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 EXOC4Q96A65 974 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 KIF9Q9HAQ2 790 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 MFAP3LO75121 409 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 ARL13BQ3SXY8 428 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 SCARA5Q6ZMJ2 495 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 UNC13DQ70J99 1090 aa19.92■□□□□ 0.78
USP25-204ENST00000400183 BZW1Q7L1Q6 419 aaKnown RBP19.92■□□□□ 0.78
USP25-204ENST00000400183 TUBB6Q9BUF5 446 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms