RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZNF609O15014 1411 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 TNS2Q63HR2 1409 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 A0A1B0GUL7 405 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 FZD9O00144 591 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 CTAGE5O15320 804 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 ADCY5O95622 1261 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 NEFHP12036 1026 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 CPEP16870 476 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 MTX1Q13505 466 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 CLEC17AQ6ZS10 378 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 EP400NLQ6ZTU2 488 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 SPATS2Q86XZ4 545 aaKnown RBP6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 BICD2Q8TD16 824 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 CHCHD3Q9NX63 227 aaKnown RBP6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 DACT1Q9NYF0 836 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 ANKIB1Q9P2G1 1089 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 LRFN2Q9ULH4 789 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 GOLGA6L4A6NEF3 574 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 H3BQV1 296 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 M0R2C6 588 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 PARP1P09874 1014 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 IL6STP40189 918 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 CSE1LP55060 971 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SH3BGRP55822 239 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 IFFO2Q5TF58 517 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 ITPRIPL1Q6GPH6 555 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 CEP68Q76N32 757 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 RHOVQ96L33 236 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SLC26A6Q9BXS9 759 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 AGO4Q9HCK5 861 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 BABAM1Q9NWV8 329 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 PCSK1NQ9UHG2 260 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 JAG2Q9Y219 1238 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SCN11AQ9UI33 1791 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 GIPC1O14908 333 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 USP2O75604 605 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 MBD3O95983 291 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 ATP6V1B1P15313 513 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 FOXO4P98177 505 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 LMNB2Q03252 620 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SLC14A2Q15849 920 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 FAM182BQ5T319 152 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 TMCO3Q6UWJ1 677 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SYDE1Q6ZW31 735 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 CHST15Q7LFX5 561 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 ATG9AQ7Z3C6 839 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SAPCD2Q86UD0 394 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SLC51AQ86UW1 340 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 MYCT1Q8N699 235 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 KCTD13Q8WZ19 329 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZNF75CPQ92670 426 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 INTS4Q96HW7 963 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 AIFM3Q96NN9 605 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 MYL10Q9BUA6 226 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 RUSC1Q9BVN2 902 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 FANCFQ9NPI8 374 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 TRPC5Q9UL62 973 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 MAP4K5Q9Y4K4 846 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SIPA1L3O60292 1781 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 ANKRD18BA2A2Z9 1011 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 RRN3P2A6NIE6 340 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SMIM22K7EJ46 135 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 BRINP1O60477 761 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 POLR3DP05423 398 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SFTPCP11686 197 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 KRT10P13645 584 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 LIMK1P53667 647 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 MRPL28Q13084 256 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 PPFIA1Q13136 1202 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 EIF2B5Q13144 721 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 GTF2H3Q13889 308 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 PDE12Q6L8Q7 609 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 LLGL2Q6P1M3 1020 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 CPA6Q8N4T0 437 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 SCG3Q8WXD2 468 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 BHMTQ93088 406 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 UBXN10Q96LJ8 280 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 LRGUKQ96M69 825 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 NEK1Q96PY6 1258 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 LZTS2Q9BRK4 669 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 LRRC4BQ9NT99 713 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 ABCF3Q9NUQ8 709 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 PAG1Q9NWQ8 432 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 N6AMT1Q9Y5N5 214 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 MRC1P22897 1456 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 TOGARAM1Q9Y4F4 1720 aa6.91□□□□□ -1.3
TRAPPC13-202ENST00000399438 AOX1Q06278 1338 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 POTECB2RU33 542 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 IDH1O75874 414 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 PDGFAP04085 211 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 RHCEP18577 417 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 GBP2P32456 591 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 CCNFP41002 786 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZAP70P43403 619 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 TMPRSS15P98073 1019 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms