RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 TRAPPC10P48553 1259 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 CCZ1BP86790 482 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 CCZ1P86791 482 aaPredicted RBP11.81□□□□□ -0.52
MSL3-207ENST00000398527 RESP18Q5W5W9 173 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 KRT40Q6A162 431 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 JAZF1Q86VZ6 243 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 VPS37DQ86XT2 251 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 ESX1Q8N693 406 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 SPATA5Q8NB90 893 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 A0A1B0GUL6 1792 aa11.81□□□□□ -0.52
MSL3-207ENST00000398527 A0A1B0GVL5 298 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 PCP11498 1178 aaKnown RBP11.8□□□□□ -0.52
MSL3-207ENST00000398527 PFKFB1P16118 471 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 S100A5P33763 92 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 SKIV2L2P42285 1042 aaKnown RBP11.8□□□□□ -0.52
MSL3-207ENST00000398527 LRMPQ12912 555 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 TAF1CQ15572 869 aaPredicted RBP11.8□□□□□ -0.52
MSL3-207ENST00000398527 THOC7Q6I9Y2 204 aaKnown RBP11.8□□□□□ -0.52
MSL3-207ENST00000398527 AOPEPQ8N6M6 819 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
MSL3-207ENST00000398527 SEC31BQ9NQW1 1179 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 FAM217BQ9NTX9 383 aaPredicted RBP11.8□□□□□ -0.52
MSL3-207ENST00000398527 MUSKO15146 869 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 NT5C2P49902 561 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 INHBCP55103 352 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 CUL4BQ13620 913 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 BOLA3Q53S33 107 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 RSPH3Q86UC2 560 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 IFNL3Q8IZI9 196 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
MSL3-207ENST00000398527 ZNF397Q8NF99 534 aaPredicted RBP11.8□□□□□ -0.52
MSL3-207ENST00000398527 ACMSDQ8TDX5 336 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 TEKT4Q8WW24 435 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 DISC1Q9NRI5 854 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 KRT82Q9NSB4 513 aa11.8□□□□□ -0.52
MSL3-207ENST00000398527 CCDC69A6NI79 296 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 GOLGA6L10A6NI86 522 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 ATP8B1O43520 1251 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
MSL3-207ENST00000398527 PDE4DQ08499 809 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 NCAPHQ15003 741 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 SF3B3Q15393 1217 aaKnown RBP11.79□□□□□ -0.52
MSL3-207ENST00000398527 LRRC43Q8N309 656 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 FOXP1Q9H334 677 aaPredicted RBP11.79□□□□□ -0.52
MSL3-207ENST00000398527 FANCFQ9NPI8 374 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 SLC5A4Q9NY91 659 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 TTLL3Q9Y4R7 772 aa11.79□□□□□ -0.52
MSL3-207ENST00000398527 GOLGA8AA7E2F4 631 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 ATP9BO43861 1147 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 POLR3DP05423 398 aaPredicted RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 IDEP14735 1019 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 SYKP43405 635 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 TUBA1BP68363 451 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 SSRP1Q08945 709 aaKnown RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 SUZ12Q15022 739 aaKnown RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 TMEM67Q5HYA8 995 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 TUBA1AQ71U36 451 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 ZNF804AQ7Z570 1209 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 TADA2BQ86TJ2 420 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 NPAS4Q8IUM7 802 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 SGCDQ92629 289 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 RBM41Q96IZ5 413 aaKnown RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 JPH2Q9BR39 696 aaPredicted RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 FAM167BQ9BTA0 163 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 NAPBQ9H115 298 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 MRPL46Q9H2W6 279 aaKnown RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 HOOK1Q9UJC3 728 aaKnown RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 LILRB3O75022 631 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 RECKO95980 971 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 PAHP00439 452 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 MYCP01106 439 aaPredicted RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 ZFXP17010 805 aaPredicted RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 CDC27P30260 824 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 CENPAP49450 140 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 BNIP1Q12981 228 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 LRP8Q14114 963 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 DPCR1Q3MIW9 517 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 SLC10A5Q5PT55 438 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 OTUD7BQ6GQQ9 843 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 CCAR2Q8N163 923 aaKnown RBP11.78□□□□□ -0.52
MSL3-207ENST00000398527 TTC39CQ8N584 583 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 NRDE2Q9H7Z3 1164 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 STK39Q9UEW8 545 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 CARD8Q9Y2G2 431 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 SLC12A7Q9Y666 1083 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 ZNF804BA4D1E1 1349 aa11.78□□□□□ -0.52
MSL3-207ENST00000398527 GSG1L2A8MUP6 293 aa11.77□□□□□ -0.52
MSL3-207ENST00000398527 B4E1Z4 1266 aa11.77□□□□□ -0.52
MSL3-207ENST00000398527 AHCYL1O43865 530 aa11.77□□□□□ -0.52
MSL3-207ENST00000398527 ZNF254O75437 659 aa11.77□□□□□ -0.52
MSL3-207ENST00000398527 GLULP15104 373 aa11.77□□□□□ -0.52
MSL3-207ENST00000398527 GNALP38405 381 aa11.77□□□□□ -0.52
MSL3-207ENST00000398527 PEX5P50542 639 aa11.77□□□□□ -0.52
MSL3-207ENST00000398527 COPAP53621 1224 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms