RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SPATA31E1Q6ZUB1 1445 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 RRP9O43818 475 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 SLC25A27O95847 323 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 GJB2P29033 226 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 LONP1P36776 959 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 NAA20P61599 178 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 FKBP1BP68106 108 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 KRT17Q04695 432 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 FRA10AC1Q70Z53 315 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EFL1Q7Z2Z2 1120 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 ARRDC4Q8NCT1 418 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 SPDYE1Q8NFV5 336 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 PAWRQ96IZ0 340 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 ZSCAN10Q96SZ4 725 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 TRAIPQ9BWF2 469 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 COA1Q9GZY4 146 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 SERPINB13Q9UIV8 391 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 AFG3L2Q9Y4W6 797 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MED1Q15648 1581 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 PYGMP11217 842 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EEF1GP26641 437 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 HSPA1LP34931 641 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TFAP4Q01664 338 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 RASGRF1Q13972 1273 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 FAM47CQ5HY64 1035 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 GADL1Q6ZQY3 521 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 PLEKHM2Q8IWE5 1019 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 PHKBQ93100 1093 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 XPO6Q96QU8 1125 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 SLC12A5Q9H2X9 1139 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ZFYVE28Q9HCC9 887 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 GPR108Q9NPR9 543 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 FGFR1OP2Q9NVK5 253 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 RAB20Q9NX57 234 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 HACD3Q9P035 362 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EVPLQ92817 2033 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MEGF6O75095 1541 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 COL15A1P39059 1388 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TTC4O95801 387 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 GSNP06396 782 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MYBL1P10243 752 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 PMLP29590 882 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 PNPLA4P41247 253 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MYL7Q01449 175 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 CEBPZQ03701 1054 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 IZUMO3Q5VZ72 239 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 USPL1Q5W0Q7 1092 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ARL6IP4Q66PJ3 421 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 TTC19Q6DKK2 380 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 GALNT18Q6P9A2 607 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TTC23LQ6PF05 361 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 CCDC121Q6ZUS5 278 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 SCFD1Q8WVM8 642 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 STAMQ92783 540 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.94□□□□□ -1.943e-6■■■□□ 19.2
CHD9-202ENST00000398510 FSD1LQ9BXM9 530 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 SLC39A8Q9C0K1 460 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 WDR70Q9NW82 654 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 CD163L1Q9NR16 1453 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 HNRNPCL2B2RXH8 293 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 H7C4K7 107 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 HNRNPCL1O60812 293 aaKnown RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 H2AFYO75367 372 aaKnown RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 ST8SIA6P61647 398 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 MCM6Q14566 821 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 NAA25Q14CX7 972 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 IQCB1Q15051 598 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 ANO4Q32M45 955 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 SLC45A4Q5BKX6 768 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 RAET1EQ8TD07 263 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 DCAF4Q8WV16 495 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 TUBB6Q9BUF5 446 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 RNF26Q9BY78 433 aaPredicted RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 EML4Q9HC35 981 aaKnown RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 GIMAP4Q9NUV9 329 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 UVRAGQ9P2Y5 699 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 DDX25Q9UHL0 483 aaKnown RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.93□□□□□ -1.94
CHD9-202ENST00000398510 ZNF804BA4D1E1 1349 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 PTPRUQ92729 1446 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 SCN4AP35499 1836 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 WNK3Q9BYP7 1800 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 A0A088AWK7 358 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 ZSCAN22P10073 491 aaPredicted RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 ZNF10P21506 573 aaPredicted RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 ERFEQ4G0M1 354 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 ANKRD20A4Q4UJ75 823 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 ANKRD20A8PQ5CZ79 823 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 ANKRD20A2Q5SQ80 823 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 ANKRD20A1Q5TYW2 823 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 ENOSF1Q7L5Y1 443 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 OOSP2Q86WS3 158 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 IFNL3Q8IZI9 196 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.93□□□□□ -1.94
CHD9-202ENST00000398510 MAGEB10Q96LZ2 347 aaPredicted RBP2.93□□□□□ -1.94
CHD9-202ENST00000398510 ATAD3AQ9NVI7 634 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 USP16Q9Y5T5 823 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 PIGBOS1A0A0B4J2F0 54 aa2.93□□□□□ -1.94
CHD9-202ENST00000398510 PI4KAP2A4QPH2 592 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms