RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 AGRPO00253 132 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 ARNTLO00327 626 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 TBX1O43435 398 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 LRG1P02750 347 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 ITGAVP06756 1048 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 FGFR1P11362 822 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 SLC6A11P48066 632 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 KRTAP10-11P60412 298 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 NKX3-2P78367 333 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 AMPD2Q01433 879 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 GRB10Q13322 594 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 TRMT10BQ6PF06 316 aaKnown RBP4.03□□□□□ -1.76
CD47-203ENST00000398258 TEPPQ6URK8 271 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 GPR155Q7Z3F1 870 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 BVESQ8NE79 360 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 FEZ1Q99689 392 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 MMRN2Q9H8L6 949 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 GPRC5CQ9NQ84 441 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 BTG4Q9NY30 223 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 LRP2BPQ9P2M1 347 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 FBXL7Q9UJT9 491 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 SLC4A7Q9Y6M7 1214 aa4.03□□□□□ -1.76
CD47-203ENST00000398258 ANKRD62A6NC57 917 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 NOP56O00567 594 aaKnown RBP4.02□□□□□ -1.77
CD47-203ENST00000398258 KCNQ2O43526 872 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 RFPL3O75679 317 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 CLSTN1O94985 981 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 PLS3P13797 630 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 NCLP19338 710 aaKnown RBP4.02□□□□□ -1.77
CD47-203ENST00000398258 PPP2R2AP63151 447 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 HSP90AA2PQ14568 343 aaPredicted RBP4.02□□□□□ -1.77
CD47-203ENST00000398258 TCEA2Q15560 299 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 POMZP3Q6PJE2 187 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 TMC5Q6UXY8 1006 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 TAX1BP1Q86VP1 789 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 PROSER1Q86XN7 944 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 TRIM59Q8IWR1 403 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 OSBP2Q969R2 916 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 CLIC6Q96NY7 704 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 LMF1Q96S06 567 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 SEC61A2Q9H9S3 476 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 FTSJ1Q9UET6 329 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 PRKAB1Q9Y478 270 aa4.02□□□□□ -1.77
CD47-203ENST00000398258 TRAV20A0A0B4J274 112 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 SCG5P05408 212 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 VIL1P09327 827 aaKnown RBP4.01□□□□□ -1.77
CD47-203ENST00000398258 ACO1P21399 889 aaKnown RBP4.01□□□□□ -1.77
CD47-203ENST00000398258 COMTP21964 271 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 CSF2RBP32927 897 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 SCRN1Q12765 414 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 TESK1Q15569 626 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 TKFCQ3LXA3 575 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 HS1BP3Q53T59 392 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 FOXB2Q5VYV0 432 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 GTF2IRD2BQ6EKJ0 949 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 GTF2IRD2Q86UP8 949 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 C1orf210Q8IVY1 113 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 Q8N1Y9 231 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 CRACR2BQ8N4Y2 399 aaPredicted RBP4.01□□□□□ -1.77
CD47-203ENST00000398258 BTN2A2Q8WVV5 523 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 COPS5Q92905 334 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 EXOC2Q96KP1 924 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 CCDC140Q96MF4 163 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 AARSD1Q9BTE6 412 aaKnown RBP4.01□□□□□ -1.77
CD47-203ENST00000398258 DHRS4Q9BTZ2 278 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 DTLQ9NZJ0 730 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.01□□□□□ -1.77
CD47-203ENST00000398258 PLAAQ9Y263 795 aa4.01□□□□□ -1.77
CD47-203ENST00000398258 TCRBV5S2A0A599 114 aa4□□□□□ -1.77
CD47-203ENST00000398258 PABPC1P11940 636 aaKnown RBP4□□□□□ -1.77
CD47-203ENST00000398258 GYS2P54840 703 aa4□□□□□ -1.77
CD47-203ENST00000398258 MAP4K2Q12851 820 aa4□□□□□ -1.77
CD47-203ENST00000398258 FNDC3BQ53EP0 1204 aaKnown RBP4□□□□□ -1.77
CD47-203ENST00000398258 DALRD3Q5D0E6 543 aaKnown RBP4□□□□□ -1.77
CD47-203ENST00000398258 TRIM61Q5EBN2 209 aa4□□□□□ -1.77
CD47-203ENST00000398258 RALYLQ86SE5 291 aaKnown RBP4□□□□□ -1.77
CD47-203ENST00000398258 NTN5Q8WTR8 489 aaPredicted RBP4□□□□□ -1.77
CD47-203ENST00000398258 NEIL1Q96FI4 390 aaPredicted RBP4□□□□□ -1.77
CD47-203ENST00000398258 TOE1Q96GM8 510 aaKnown RBP4□□□□□ -1.77
CD47-203ENST00000398258 C1orf159Q96HA4 380 aa4□□□□□ -1.77
CD47-203ENST00000398258 PLEKHG4BQ96PX9 1271 aa4□□□□□ -1.77
CD47-203ENST00000398258 MMP19Q99542 508 aa4□□□□□ -1.77
CD47-203ENST00000398258 MRPL4Q9BYD3 311 aaKnown RBP4□□□□□ -1.77
CD47-203ENST00000398258 NKX2-4Q9H2Z4 354 aa4□□□□□ -1.77
CD47-203ENST00000398258 BARX1Q9HBU1 254 aaPredicted RBP4□□□□□ -1.77
CD47-203ENST00000398258 CYP26B1Q9NR63 512 aa4□□□□□ -1.77
CD47-203ENST00000398258 TMEFF2Q9UIK5 374 aaPredicted RBP4□□□□□ -1.77
CD47-203ENST00000398258 MRPS23Q9Y3D9 190 aaKnown RBP4□□□□□ -1.77
CD47-203ENST00000398258 TRBV23-1A0A0A0MS06 115 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 PLD2O14939 933 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 PPFIA2O75334 1257 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 ONECUT2O95948 504 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 C6orf222P0C671 652 aaPredicted RBP3.99□□□□□ -1.77
CD47-203ENST00000398258 ZNF888P0CJ79 500 aaPredicted RBP3.99□□□□□ -1.77
CD47-203ENST00000398258 HOXC12P31275 282 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 GJA4P35212 333 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 ECI1P42126 302 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 GRIA2P42262 883 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 GFRA1P56159 465 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 DUSP8Q13202 625 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms