RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HERVK_113P62684 666 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 HDLBPQ00341 1268 aaKnown RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 MECOMQ03112 1051 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 MORC4Q8TE76 937 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 OLFML3Q9NRN5 406 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TMEM59LQ9UK28 342 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PNMA2Q9UL42 364 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SLC16A3O15427 465 aaKnown RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ADCY7P51828 1080 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 INF2Q27J81 1249 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 NBPF9Q3BBW0 867 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 HGSNATQ68CP4 663 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 BTNL9Q6UXG8 535 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TAOK1Q7L7X3 1001 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 CEP120Q8N960 986 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 RAB3IL1Q8TBN0 382 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ACTRT1Q8TDG2 376 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 RAB3IPQ96QF0 476 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 VAT1LQ9HCJ6 419 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 FAM207AQ9NSI2 230 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PFASO15067 1338 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SPATA31A1Q5TZJ5 1347 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF831Q5JPB2 1677 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 BHMG1C9JSJ3 638 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 SART1O43290 800 aaKnown RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 H2AFZP0C0S5 128 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 ATP5DP30049 168 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 ELF1P32519 619 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 TXNRD1Q16881 649 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 H2AFVQ71UI9 128 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 ADGRA1Q86SQ6 560 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 MTMR8Q96EF0 704 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 OSBPL9Q96SU4 736 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 CNOT10Q9H9A5 744 aaKnown RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 PCDHA6Q9UN73 950 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 PCDHA8Q9Y5H6 950 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 IRS2Q9Y4H2 1338 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 RGS16O15492 202 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 POTEJP0CG39 1038 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 ATP2B4P23634 1241 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 CIITAP33076 1130 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 IFNAR2P48551 515 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 MMP14P50281 582 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 HADHBP55084 474 aaKnown RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 SATB1Q01826 763 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 SPDL1Q96EA4 605 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 TMEM60Q9H2L4 133 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 STX8Q9UNK0 236 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 LAMA4Q16363 1823 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 LRRIQ3A6PVS8 624 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 CYTH3O43739 400 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 NR1D1P20393 614 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 MCCD1P59942 119 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 GABPAQ06546 454 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 BICDL1Q6ZP65 573 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 STXBP4Q6ZWJ1 553 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 FRMD5Q7Z6J6 570 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 NKX2-3Q8TAU0 364 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 KRT12Q99456 494 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 SH3GL3Q99963 347 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 CD2APQ9Y5K6 639 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 UBE2Q2LH0YL09 131 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 KIF3CO14782 793 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 P4HA2O15460 535 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 OPHN1O60890 802 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 TSPY3P0CV98 308 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 TSPY8P0CW00 308 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 GRAPQ13588 217 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 MAP7Q14244 749 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 CRY2Q49AN0 593 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 HEATR3Q7Z4Q2 680 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 ANKRD13CQ8N6S4 541 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 GRAPLQ8TC17 118 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 TBC1D5Q92609 795 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 KLHL14Q9P2G3 628 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 SMCO2A6NFE2 343 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 HEXIM1O94992 359 aaKnown RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 FSBPO95073 299 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 ENPEPQ07075 957 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 NAB2Q15742 525 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 SEL1L2Q5TEA6 688 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 DEFB129Q9H1M3 183 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 SRGAP2O75044 1071 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 STX2P32856 288 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 RPS6KA1Q15418 735 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 SFMBT2Q5VUG0 894 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 C2CD5Q86YS7 1000 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 KCNV2Q8TDN2 545 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 PGM2Q96G03 612 aa5.93□□□□□ -1.46
PTPRD-205ENST00000397611 ARMCX3Q9UH62 379 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-205ENST00000397611 NOL3O60936 208 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ATP1A1P05023 1023 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 IL1R1P14778 569 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SLC7A5Q01650 507 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ANKRD40Q6AI12 368 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 VPS52Q8N1B4 723 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 KLRG2A4D1S0 409 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ENO4A6NNW6 628 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms