RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TRAPPC10P48553 1259 aa23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 JAK3P52333 1124 aa23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 ZNF200P98182 395 aaPredicted RBP23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 HIC1Q14526 733 aa23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 TTC38Q5R3I4 469 aa23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 SWSAP1Q6NVH7 229 aa23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 AFAP1L1Q8TED9 768 aa23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 CTAGE1Q96RT6 745 aa23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 HIPK3Q9H422 1215 aa23.91■■□□□ 1.42
TSPAN4-206ENST00000397408 VPS37CA5D8V6 355 aaPredicted RBP23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 BAG4O95429 457 aaKnown RBP23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 HSP90AA1P07900 732 aaKnown RBP23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 HOXC8P31273 242 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 SFNP31947 248 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 PDXDC2PQ6P474 469 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 B3GNT9Q6UX72 402 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 CHRDL2Q6WN34 429 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 MIER3Q7Z3K6 550 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 SLFN12Q8IYM2 578 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 BADQ92934 168 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 NOC4LQ9BVI4 516 aaKnown RBP23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 SETD4Q9NVD3 440 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 VAV3Q9UKW4 847 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 TRPC6Q9Y210 931 aa23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 TRIP12Q14669 1992 aaPredicted RBP23.9■■□□□ 1.42
TSPAN4-206ENST00000397408 UMODL1Q5DID0 1318 aa23.89■■□□□ 1.42
TSPAN4-206ENST00000397408 TIMP1P01033 207 aa23.89■■□□□ 1.41
TSPAN4-206ENST00000397408 SLC26A2P50443 739 aa23.89■■□□□ 1.41
TSPAN4-206ENST00000397408 PPFIA1Q13136 1202 aa23.89■■□□□ 1.41
TSPAN4-206ENST00000397408 NBR1Q14596 966 aa23.89■■□□□ 1.41
TSPAN4-206ENST00000397408 PLCB4Q15147 1175 aa23.89■■□□□ 1.41
TSPAN4-206ENST00000397408 ZNF174Q15697 407 aa23.89■■□□□ 1.41
TSPAN4-206ENST00000397408 GABBR1Q9UBS5 961 aa23.89■■□□□ 1.41
TSPAN4-206ENST00000397408 IGSF9BQ9UPX0 1349 aa23.88■■□□□ 1.41
TSPAN4-206ENST00000397408 PPP2R5CQ13362 524 aa23.88■■□□□ 1.41
TSPAN4-206ENST00000397408 ORC2Q13416 577 aaPredicted RBP23.88■■□□□ 1.41
TSPAN4-206ENST00000397408 RDM1Q8NG50 284 aa23.88■■□□□ 1.41
TSPAN4-206ENST00000397408 LMBR1Q8WVP7 490 aa23.88■■□□□ 1.41
TSPAN4-206ENST00000397408 ATP6V0A1Q93050 837 aa23.88■■□□□ 1.41
TSPAN4-206ENST00000397408 GDF15Q99988 308 aa23.88■■□□□ 1.41
TSPAN4-206ENST00000397408 TMEM60Q9H2L4 133 aa23.88■■□□□ 1.41
TSPAN4-206ENST00000397408 KAT6AQ92794 2004 aa23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 NRCAMQ92823 1304 aa23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 MYH9P35579 1960 aaKnown RBP23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 GNAT1P11488 350 aa23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 SYT1P21579 422 aa23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 CYP2C18P33260 490 aa23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 TOB1P50616 345 aaPredicted RBP23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 GRIK4Q16099 956 aa23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 CKAP2LQ8IYA6 745 aa23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 DHX38Q92620 1227 aaKnown RBP23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 MAFBQ9Y5Q3 323 aaPredicted RBP23.87■■□□□ 1.41
TSPAN4-206ENST00000397408 WDR81Q562E7 1941 aa23.86■■□□□ 1.41
TSPAN4-206ENST00000397408 POTEB3A0JP26 581 aa23.86■■□□□ 1.41
TSPAN4-206ENST00000397408 EML1O00423 815 aa23.86■■□□□ 1.41
TSPAN4-206ENST00000397408 TREHO43280 583 aa23.86■■□□□ 1.41
TSPAN4-206ENST00000397408 UGCGQ16739 394 aa23.86■■□□□ 1.41
TSPAN4-206ENST00000397408 POTEBQ6S5H4 581 aa23.86■■□□□ 1.41
TSPAN4-206ENST00000397408 ATP8B4Q8TF62 1192 aa23.86■■□□□ 1.41
TSPAN4-206ENST00000397408 MTMR9Q96QG7 549 aa23.86■■□□□ 1.41
TSPAN4-206ENST00000397408 INSRRP14616 1297 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 ATP4AP20648 1035 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 TXKP42681 527 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 CCL23P55773 120 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 IGBP1P78318 339 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 SPIRE1Q08AE8 756 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 PTK7Q13308 1070 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 BFSP2Q13515 415 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 NCAPH2Q6IBW4 605 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 MFSD5Q6N075 450 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 SERINC5Q86VE9 423 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 CCDC155Q8N6L0 562 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 TNPO1Q92973 898 aaKnown RBP23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 WNT8BQ93098 351 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 WNT8AQ9H1J5 351 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 TTC12Q9H892 705 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 PCDHB6Q9Y5E3 794 aa23.85■■□□□ 1.41
TSPAN4-206ENST00000397408 OR52Z1P0C646 297 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 ADAM17P78536 824 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 RILPL1Q5EBL4 403 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 TRMT1LQ7Z2T5 733 aaKnown RBP23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 FERMT3Q86UX7 667 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 CAGE1Q8TC20 777 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 PCDHA12Q9UN75 941 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 RANBP2P49792 3224 aaKnown RBP23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 PITPNM1O00562 1244 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 ZNF862O60290 1169 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 HBP1O60381 514 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 PRKCEQ02156 737 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 FPGSQ05932 587 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 TMEM199Q8N511 208 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 SPRYD3Q8NCJ5 442 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 UBE2OQ9C0C9 1292 aaKnown RBP23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 TUBE1Q9UJT0 475 aa23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 COLQQ9Y215 455 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-206ENST00000397408 RRN3P2A6NIE6 340 aa23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 TRIM71Q2Q1W2 868 aaKnown RBP23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 BRAPQ7Z569 592 aa23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 RETREG2Q8NC44 543 aa23.83■■□□□ 1.4
TSPAN4-206ENST00000397408 BANK1Q8NDB2 785 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms