RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 IFNAR1P17181 557 aa8.72□□□□□ -1.01
SOX6-202ENST00000396356 RXRGP48443 463 aa8.72□□□□□ -1.01
SOX6-202ENST00000396356 COPB1P53618 953 aaKnown RBP8.72□□□□□ -1.01
SOX6-202ENST00000396356 ART3Q13508 389 aa8.72□□□□□ -1.01
SOX6-202ENST00000396356 P3H1Q32P28 736 aa8.72□□□□□ -1.01
SOX6-202ENST00000396356 ZBTB38Q8NAP3 1195 aaPredicted RBP8.72□□□□□ -1.01
SOX6-202ENST00000396356 CEP19Q96LK0 163 aa8.72□□□□□ -1.01
SOX6-202ENST00000396356 GOLPH3LQ9H4A5 285 aa8.72□□□□□ -1.01
SOX6-202ENST00000396356 PRDM10Q9NQV6 1147 aa8.72□□□□□ -1.01
SOX6-202ENST00000396356 TXNDC9O14530 226 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 GNGT2O14610 69 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 GSTA4O15217 222 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 FMNL1O95466 1100 aaPredicted RBP8.71□□□□□ -1.01
SOX6-202ENST00000396356 SESTD1Q86VW0 696 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 SCFD1Q8WVM8 642 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 NUP85Q9BW27 656 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 VPS16Q9H269 839 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 PARVGQ9HBI0 331 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 XAB2Q9HCS7 855 aaKnown RBP8.71□□□□□ -1.01
SOX6-202ENST00000396356 MIS18AQ9NYP9 233 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 TUBGCP4Q9UGJ1 667 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 HNRNPDLO14979 420 aaKnown RBP8.71□□□□□ -1.01
SOX6-202ENST00000396356 CTNND1O60716 968 aaKnown RBP8.71□□□□□ -1.01
SOX6-202ENST00000396356 MYO1DO94832 1006 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 NLRP11P59045 1033 aaKnown RBP8.71□□□□□ -1.01
SOX6-202ENST00000396356 SGO2Q562F6 1265 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 P2RX5Q93086 422 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 MRPL48Q96GC5 212 aaKnown RBP8.71□□□□□ -1.01
SOX6-202ENST00000396356 CPSF3Q9UKF6 684 aaKnown RBP8.71□□□□□ -1.01
SOX6-202ENST00000396356 A0A1W2PQC6 194 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 BBOX1O75936 387 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 DNAJC24Q6P3W2 148 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 RMDN2Q96LZ7 410 aa8.71□□□□□ -1.01
SOX6-202ENST00000396356 AATFQ9NY61 560 aaKnown RBP eCLIP8.71□□□□□ -1.01
SOX6-202ENST00000396356 APOBEC2Q9Y235 224 aaKnown RBP8.71□□□□□ -1.01
SOX6-202ENST00000396356 H0Y626 953 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 TRIM16O95361 564 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 MT-ND3P03897 115 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 KCNA6P17658 529 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 PIK3CAP42336 1068 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 RWDD2BP57060 319 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 ARHGEF16Q5VV41 709 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 TSPAN17Q96FV3 270 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 TRIM54Q9BYV2 358 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 ZNF148Q9UQR1 794 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 HNRNPCL2B2RXH8 293 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 SNUPNO95149 360 aaKnown RBP8.71□□□□□ -1.02
SOX6-202ENST00000396356 BRAFP15056 766 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 POLGP54098 1239 aaPredicted RBP8.71□□□□□ -1.02
SOX6-202ENST00000396356 BASP1P80723 227 aaKnown RBP8.71□□□□□ -1.02
SOX6-202ENST00000396356 DHX9Q08211 1270 aaKnown RBP8.71□□□□□ -1.02
SOX6-202ENST00000396356 GLG1Q92896 1179 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 KLHL29Q96CT2 875 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 GINM1Q9NU53 330 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 NUB1Q9Y5A7 615 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 SNX5Q9Y5X3 404 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 ABCB11O95342 1321 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 IFNB1P01574 187 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 GCP02774 474 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 MTX1Q13505 466 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 SUPT20HL1Q3ZLR7 823 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 DNAL1Q4LDG9 190 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 ISM2Q6H9L7 571 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 CLEC17AQ6ZS10 378 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 DGKHQ86XP1 1220 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 LARP6Q9BRS8 491 aaKnown RBP8.71□□□□□ -1.02
SOX6-202ENST00000396356 STAP1Q9ULZ2 295 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 KANSL1LA0AUZ9 987 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 SMIM23A6NLE4 172 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 DR1Q01658 176 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 VSTM4Q8IW00 320 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 U2AF1L4Q8WU68 220 aaKnown RBP8.71□□□□□ -1.02
SOX6-202ENST00000396356 ZMYND12Q9H0C1 365 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 CEP72Q9P209 647 aa8.71□□□□□ -1.02
SOX6-202ENST00000396356 STX17P56962 302 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 SFSWAPQ12872 951 aaKnown RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 PICALMQ13492 652 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 SNX1Q13596 522 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 FAM186BQ8IYM0 893 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 THOC5Q13769 683 aaKnown RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 DCAF4Q8WV16 495 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 CEP95Q96GE4 821 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.7□□□□□ -1.02
SOX6-202ENST00000396356 PRPSAP2O60256 369 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 HSPA1AP0DMV8 641 aaKnown RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 HSPA1BP0DMV9 641 aaKnown RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 YWHAGP61981 247 aaKnown RBP eCLIP8.7□□□□□ -1.02
SOX6-202ENST00000396356 IRX1P78414 480 aaPredicted RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 NLGN1Q8N2Q7 840 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 FAM193BQ96PV7 902 aaPredicted RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 TBC1D22BQ9NU19 505 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 RRP15Q9Y3B9 282 aaKnown RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 PRPF3O43395 683 aaKnown RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 IL6STP40189 918 aaPredicted RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 CCDC92Q53HC0 331 aaPredicted RBP8.7□□□□□ -1.02
SOX6-202ENST00000396356 XRRA1Q6P2D8 792 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 CLEC4GQ6UXB4 293 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 SH3GL3Q99963 347 aa8.7□□□□□ -1.02
SOX6-202ENST00000396356 C2orf40Q9H1Z8 148 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms