RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 EPB41L5Q9HCM4 733 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 NOVA2Q9UNW9 492 aaKnown RBP10.54□□□□□ -0.72
CDRT1-204ENST00000395906 ZBTB1Q9Y2K1 713 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 SPO11Q9Y5K1 396 aa10.54□□□□□ -0.72
CDRT1-204ENST00000395906 ADAMTS7Q9UKP4 1686 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 CARMIL3Q8ND23 1372 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 NVLO15381 856 aaKnown RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 TJP3O95049 919 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 POLR3DP05423 398 aaPredicted RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 GLI1P08151 1106 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 VDRP11473 427 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 PTDSS1P48651 473 aaKnown RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 MDM2Q00987 491 aaPredicted RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 RESP18Q5W5W9 173 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 SHC4Q6S5L8 630 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 SEPT12Q8IYM1 358 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 CFAP61Q8NHU2 1237 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 ZNF180Q9UJW8 692 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 IQSEC3Q9UPP2 1182 aaPredicted RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 TNS2Q63HR2 1409 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 NRAPQ86VF7 1730 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 TMEM110-MUSTN1A8MSY1 372 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 NDUFB5O43674 189 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 AKR1B10O60218 316 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 PPP6R2O75170 966 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 HEXIM1O94992 359 aaKnown RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 PDGFRBP09619 1106 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 SPATA31D3P0C874 917 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 CCNFP41002 786 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 MAGOHP61326 146 aaKnown RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 RCN2Q14257 317 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 CDKAL1Q5VV42 579 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 SPATA31D4Q6ZUB0 917 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 PIGOQ8TEQ8 1089 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 GATA6Q92908 595 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 MAGOHBQ96A72 148 aaKnown RBP10.53□□□□□ -0.72
CDRT1-204ENST00000395906 GPATCH3Q96I76 525 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 SIKE1Q9BRV8 207 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 CENPKQ9BS16 269 aa10.53□□□□□ -0.72
CDRT1-204ENST00000395906 RNF225M0QZC1 329 aaPredicted RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 RXRBP28702 533 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 MARCKSP29966 332 aaPredicted RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 HSD17B3P37058 310 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 CCT6AP40227 531 aaKnown RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 USP11P51784 963 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 ITGA7Q13683 1181 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 WASHC4Q2M389 1173 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 DAB2IPQ5VWQ8 1189 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 TRIM50Q86XT4 487 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 MAP7D3Q8IWC1 876 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 PEX5LQ8IYB4 626 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 SH3TC2Q8TF17 1288 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 EIF2AQ9BY44 585 aaKnown RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 NRDE2Q9H7Z3 1164 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 PFDN4Q9NQP4 134 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 TBCCD1Q9NVR7 557 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 HESX1Q9UBX0 185 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 LUC7L2Q9Y383 392 aaKnown RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 USH1CQ9Y6N9 552 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 MRC1P22897 1456 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 ITGB4P16144 1822 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 MMEP08473 750 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 SKIV2L2P42285 1042 aaKnown RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 ADARP55265 1226 aaKnown RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 ARPC4P59998 168 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 PDE1BQ01064 536 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 KPNB1Q14974 876 aaKnown RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 RCN1Q15293 331 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 ZNF394Q53GI3 561 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 LRRC34Q8IZ02 419 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 SYNE4Q8N205 404 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 EIF1ADQ8N9N8 165 aaKnown RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 LRRC45Q96CN5 670 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 MAML3Q96JK9 1138 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 ZMAT2Q96NC0 199 aaKnown RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
CDRT1-204ENST00000395906 ECHDC1Q9NTX5 307 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 HYOU1Q9Y4L1 999 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 MROH7Q68CQ1 1323 aa10.52□□□□□ -0.73
CDRT1-204ENST00000395906 LOC102724428A0A0B4J2F2 783 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 ATP9AO75110 1047 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 CYP1A1P04798 512 aaPredicted RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 ALDH2P05091 517 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 PORP16435 677 aaPredicted RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 HOXD11P31277 338 aaPredicted RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 CTNNA1P35221 906 aaKnown RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 SIK1P57059 783 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 GEMIN4P57678 1058 aaKnown RBP10.51□□□□□ -0.73
CDRT1-204ENST00000395906 ITPK1Q13572 414 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 INAQ16352 499 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 PARP6Q2NL67 630 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 TMEM259Q4ZIN3 620 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 SYDE2Q5VT97 1194 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 USPL1Q5W0Q7 1092 aa10.51□□□□□ -0.73
CDRT1-204ENST00000395906 OLFML2BQ68BL8 750 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms