RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MARCH6O60337 910 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 TIMP1P01033 207 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 PSAPP07602 524 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 RAG1P15918 1043 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 PLCB4Q15147 1175 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 TTC38Q5R3I4 469 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
CXCL1-201ENST00000395761 NOC4LQ9BVI4 516 aaKnown RBP18.68■□□□□ 0.58
CXCL1-201ENST00000395761 PPP1R12CQ9BZL4 782 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 TMEM60Q9H2L4 133 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 ZNF302Q9NR11 478 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 GABBR1Q9UBS5 961 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 TCEAL9Q9UHQ7 104 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 UMODL1Q5DID0 1318 aa18.68■□□□□ 0.58
CXCL1-201ENST00000395761 C17orf102A2RUQ5 167 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 WDR64B1ANS9 1081 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 EML1O00423 815 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 NEMFO60524 1076 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 ATP4AP20648 1035 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 SYT1P21579 422 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 HOXC8P31273 242 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 CYP2C18P33260 490 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 CALCRLQ16602 461 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 FAM160B1Q5W0V3 765 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 MIER3Q7Z3K6 550 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 AFAP1L1Q8TED9 768 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 MTMR9Q96QG7 549 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 GDF15Q99988 308 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 HIPK3Q9H422 1215 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 NOD1Q9Y239 953 aa18.67■□□□□ 0.58
CXCL1-201ENST00000395761 VPS37CA5D8V6 355 aaPredicted RBP18.66■□□□□ 0.58
CXCL1-201ENST00000395761 TREHO43280 583 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 BAG4O95429 457 aaKnown RBP18.66■□□□□ 0.58
CXCL1-201ENST00000395761 SFNP31947 248 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 TRAPPC10P48553 1259 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 JAK3P52333 1124 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 PPP2R5CQ13362 524 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 PDXDC2PQ6P474 469 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 CHRDL2Q6WN34 429 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 SLFN12Q8IYM2 578 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 SPRYD3Q8NCJ5 442 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 LMBR1Q8WVP7 490 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 DHX38Q92620 1227 aaKnown RBP18.66■□□□□ 0.58
CXCL1-201ENST00000395761 ATP6V0A1Q93050 837 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 WNT8BQ93098 351 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 LBHD1Q9BQE6 289 aaPredicted RBP18.66■□□□□ 0.58
CXCL1-201ENST00000395761 NOL7Q9UMY1 257 aaKnown RBP18.66■□□□□ 0.58
CXCL1-201ENST00000395761 PCDHB6Q9Y5E3 794 aa18.66■□□□□ 0.58
CXCL1-201ENST00000395761 MAFBQ9Y5Q3 323 aaPredicted RBP18.66■□□□□ 0.58
CXCL1-201ENST00000395761 POTEB3A0JP26 581 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 HSP90AA1P07900 732 aaKnown RBP18.65■□□□□ 0.58
CXCL1-201ENST00000395761 INSRRP14616 1297 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 PDCP20941 246 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 TXKP42681 527 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 ADAM17P78536 824 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 SPIRE1Q08AE8 756 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 PPFIA1Q13136 1202 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 UGCGQ16739 394 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 POTEBQ6S5H4 581 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 TRMT1LQ7Z2T5 733 aaKnown RBP18.65■□□□□ 0.58
CXCL1-201ENST00000395761 FERMT3Q86UX7 667 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 C4orf32Q8N8J7 132 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 TRPC6Q9Y210 931 aa18.65■□□□□ 0.58
CXCL1-201ENST00000395761 RBAK-RBAKDNI3L0D1 243 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 ZNF862O60290 1169 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 SLC26A2P50443 739 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 CCL23P55773 120 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 IGBP1P78318 339 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 PTK7Q13308 1070 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 GRIK4Q16099 956 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 MARCH8Q5T0T0 291 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 MFSD5Q6N075 450 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 SERINC5Q86VE9 423 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 RDM1Q8NG50 284 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 ATP8B4Q8TF62 1192 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 TRAPPC12Q8WVT3 735 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 ZBTB10Q96DT7 871 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 WNT8AQ9H1J5 351 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 PRO3102Q9H379 93 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 TTC12Q9H892 705 aaPredicted RBP18.64■□□□□ 0.57
CXCL1-201ENST00000395761 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.57
CXCL1-201ENST00000395761 PCDHA12Q9UN75 941 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 COLQQ9Y215 455 aaPredicted RBP18.64■□□□□ 0.57
CXCL1-201ENST00000395761 NRCAMQ92823 1304 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 IGSF9BQ9UPX0 1349 aa18.64■□□□□ 0.57
CXCL1-201ENST00000395761 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
CXCL1-201ENST00000395761 GNAT1P11488 350 aa18.63■□□□□ 0.57
CXCL1-201ENST00000395761 EPHB4P54760 987 aa18.63■□□□□ 0.57
CXCL1-201ENST00000395761 TRIM71Q2Q1W2 868 aaKnown RBP18.63■□□□□ 0.57
CXCL1-201ENST00000395761 NCAPH2Q6IBW4 605 aa18.63■□□□□ 0.57
CXCL1-201ENST00000395761 CKAP2LQ8IYA6 745 aa18.63■□□□□ 0.57
CXCL1-201ENST00000395761 BANK1Q8NDB2 785 aa18.63■□□□□ 0.57
CXCL1-201ENST00000395761 CSF2RAP15509 400 aa18.62■□□□□ 0.57
CXCL1-201ENST00000395761 ORC2Q13416 577 aaPredicted RBP18.62■□□□□ 0.57
CXCL1-201ENST00000395761 BFSP2Q13515 415 aa18.62■□□□□ 0.57
CXCL1-201ENST00000395761 RILPL1Q5EBL4 403 aa18.62■□□□□ 0.57
CXCL1-201ENST00000395761 RUFY4Q6ZNE9 571 aa18.62■□□□□ 0.57
CXCL1-201ENST00000395761 SCLYQ96I15 445 aa18.62■□□□□ 0.57
CXCL1-201ENST00000395761 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.62■□□□□ 0.57
CXCL1-201ENST00000395761 MTMR6Q9Y217 621 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms