RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SMRP1Q8NCR6 262 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 SPPL3Q8TCT6 385 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 DNAJB3Q8WWF6 145 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 SENP7Q9BQF6 1050 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 OSBPL3Q9H4L5 887 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 CDY2AQ9Y6F7 541 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 MBLAC1A4D2B0 266 aaPredicted RBP18.26■□□□□ 0.51
SNCA-205ENST00000394991 PTPN5P54829 565 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 TCF15Q12870 199 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 GRIK4Q16099 956 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 PCNX4Q63HM2 1172 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 TSHZ1Q6ZSZ6 1077 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 CMTR2Q8IYT2 770 aaKnown RBP18.26■□□□□ 0.51
SNCA-205ENST00000394991 EFHBQ8N7U6 833 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 PBXIP1Q96AQ6 731 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 ZBTB10Q96DT7 871 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 TUBE1Q9UJT0 475 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 PCDHGC5Q9Y5F6 944 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 PLXNA3P51805 1871 aa18.26■□□□□ 0.51
SNCA-205ENST00000394991 GSTTP1A0A1W2PQM5 241 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 ATP9AO75110 1047 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 KCNA2P16389 499 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 MARK3P27448 753 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 CD52P31358 61 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 ZXDAP98168 799 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 TROAPQ12815 778 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 COASYQ13057 564 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 CBX2Q14781 532 aaPredicted RBP18.25■□□□□ 0.51
SNCA-205ENST00000394991 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 USP17L6PQ6QN14 398 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 RSPH3Q86UC2 560 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 SMC5Q8IY18 1101 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 KLHL23Q8NBE8 558 aa18.25■□□□□ 0.51
SNCA-205ENST00000394991 BARX2Q9UMQ3 279 aaPredicted RBP18.25■□□□□ 0.51
SNCA-205ENST00000394991 ZFHX2Q9C0A1 2572 aaPredicted RBP18.24■□□□□ 0.51
SNCA-205ENST00000394991 NRIP1P48552 1158 aa18.24■□□□□ 0.51
SNCA-205ENST00000394991 MRPS6P82932 125 aaKnown RBP18.24■□□□□ 0.51
SNCA-205ENST00000394991 PAN2Q504Q3 1202 aaKnown RBP18.24■□□□□ 0.51
SNCA-205ENST00000394991 NAALADL2Q58DX5 795 aa18.24■□□□□ 0.51
SNCA-205ENST00000394991 POF1BQ8WVV4 589 aa18.24■□□□□ 0.51
SNCA-205ENST00000394991 USP15Q9Y4E8 981 aaPredicted RBP18.24■□□□□ 0.51
SNCA-205ENST00000394991 HIP1O00291 1037 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 MEIS2O14770 477 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 GATMP50440 423 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 RBM23Q86U06 439 aaKnown RBP18.23■□□□□ 0.51
SNCA-205ENST00000394991 NLRX1Q86UT6 975 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 NPAS4Q8IUM7 802 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 FBXL6Q8N531 539 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 SMARCC2Q8TAQ2 1214 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 PPP2R3CQ969Q6 453 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 YTHDC1Q96MU7 727 aaKnown RBP18.23■□□□□ 0.51
SNCA-205ENST00000394991 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 SPTBN4Q9H254 2564 aa18.23■□□□□ 0.51
SNCA-205ENST00000394991 EVPLQ92817 2033 aa18.22■□□□□ 0.51
SNCA-205ENST00000394991 IFIT3O14879 490 aaKnown RBP18.22■□□□□ 0.51
SNCA-205ENST00000394991 VCPP55072 806 aaKnown RBP18.22■□□□□ 0.51
SNCA-205ENST00000394991 IGBP1P78318 339 aa18.22■□□□□ 0.51
SNCA-205ENST00000394991 RBM10P98175 930 aaKnown RBP18.22■□□□□ 0.51
SNCA-205ENST00000394991 XRRA1Q6P2D8 792 aa18.22■□□□□ 0.51
SNCA-205ENST00000394991 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
SNCA-205ENST00000394991 SUGP1Q8IWZ8 645 aaKnown RBP18.22■□□□□ 0.51
SNCA-205ENST00000394991 GIMAP8Q8ND71 665 aaPredicted RBP18.22■□□□□ 0.51
SNCA-205ENST00000394991 SEPT1Q8WYJ6 367 aa18.22■□□□□ 0.51
SNCA-205ENST00000394991 FAM49AQ9H0Q0 323 aaPredicted RBP18.22■□□□□ 0.51
SNCA-205ENST00000394991 ERAP1Q9NZ08 941 aa18.22■□□□□ 0.51
SNCA-205ENST00000394991 CFAP54Q96N23 3096 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 PIK3CDO00329 1044 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 ITGB5P18084 799 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 WTAPQ15007 396 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 VN1R2Q8NFZ6 395 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 GPRASP2Q96D09 838 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 PCYT2Q99447 389 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 PRRX2Q99811 253 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 FAM86C1Q9NVL1 165 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 PKD2L1Q9P0L9 805 aa18.21■□□□□ 0.51
SNCA-205ENST00000394991 MYO10Q9HD67 2058 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 ST18O60284 1047 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 CYP21A2P08686 494 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 SCG2P13521 617 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 SIGLEC14Q08ET2 396 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 TMEM62Q0P6H9 643 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 TRDNQ13061 729 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 PKN1Q16512 942 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 GLG1Q92896 1179 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 ASIC4Q96FT7 647 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 PHF7Q9BWX1 381 aaPredicted RBP18.2■□□□□ 0.5
SNCA-205ENST00000394991 FTHL17Q9BXU8 183 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 PADI3Q9ULW8 664 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 TRPV2Q9Y5S1 764 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 SQORQ9Y6N5 450 aa18.2■□□□□ 0.5
SNCA-205ENST00000394991 STAG3L1P0CL83 205 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 INSRRP14616 1297 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 NUCB1Q02818 461 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 TRAPPC12Q8WVT3 735 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 SUSD6Q92537 303 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 CUL5Q93034 780 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 RPGRIP1Q96KN7 1286 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 TMX1Q9H3N1 280 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 SMARCAD1Q9H4L7 1026 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms