RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 GJB4Q9NTQ9 266 aa26.27■■□□□ 1.8
HMGA2-202ENST00000393577 TBC1D22BQ9NU19 505 aa26.27■■□□□ 1.8
HMGA2-202ENST00000393577 TMEM265A0A087WTH1 108 aa26.26■■□□□ 1.79
HMGA2-202ENST00000393577 RSPH10B2B2RC85 870 aa26.26■■□□□ 1.79
HMGA2-202ENST00000393577 CTSHP09668 335 aa26.26■■□□□ 1.79
HMGA2-202ENST00000393577 RSPH10BP0C881 870 aa26.26■■□□□ 1.79
HMGA2-202ENST00000393577 PLPPR4Q7Z2D5 763 aa26.26■■□□□ 1.79
HMGA2-202ENST00000393577 WASF1Q92558 559 aa26.26■■□□□ 1.79
HMGA2-202ENST00000393577 TRPC6Q9Y210 931 aa26.26■■□□□ 1.79
HMGA2-202ENST00000393577 BACH1O14867 736 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 ATP2A2P16615 1042 aaKnown RBP26.25■■□□□ 1.79
HMGA2-202ENST00000393577 IGBP1P78318 339 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 PLCB4Q15147 1175 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 NONOQ15233 471 aaKnown RBP eCLIP26.25■■□□□ 1.79
HMGA2-202ENST00000393577 RAB30Q15771 203 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 CNKSR3Q6P9H4 555 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 ABHD15Q6UXT9 468 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 RUFY4Q6ZNE9 571 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 NSUN7Q8NE18 718 aaKnown RBP26.25■■□□□ 1.79
HMGA2-202ENST00000393577 TCEAL9Q9UHQ7 104 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 MSRAQ9UJ68 235 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 TUBE1Q9UJT0 475 aa26.25■■□□□ 1.79
HMGA2-202ENST00000393577 IGKV6D-21A0A0A0MT36 114 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 MSH4O15457 936 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 CAND2O75155 1236 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 BAIAP3O94812 1187 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 FDPSP14324 419 aaKnown RBP26.24■■□□□ 1.79
HMGA2-202ENST00000393577 INSRRP14616 1297 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 RABGGTBP53611 331 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 TCTN1Q2MV58 587 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 FAM160B1Q5W0V3 765 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 MIS18BP1Q6P0N0 1132 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 KRT25Q7Z3Z0 450 aa26.24■■□□□ 1.79
HMGA2-202ENST00000393577 CCDC60Q8IWA6 550 aaPredicted RBP26.24■■□□□ 1.79
HMGA2-202ENST00000393577 TDP2O95551 362 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 KRT76Q01546 638 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 ST3GAL1Q11201 340 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 MARCH8Q5T0T0 291 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 ZNF746Q6NUN9 644 aaPredicted RBP26.23■■□□□ 1.79
HMGA2-202ENST00000393577 SLC9A7Q96T83 725 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 KIF2CQ99661 725 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 ZNF302Q9NR11 478 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 STXBP5LQ9Y2K9 1186 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 YBX2Q9Y2T7 364 aaKnown RBP26.23■■□□□ 1.79
HMGA2-202ENST00000393577 PTPRSQ13332 1948 aa26.23■■□□□ 1.79
HMGA2-202ENST00000393577 MYH9P35579 1960 aaKnown RBP26.22■■□□□ 1.79
HMGA2-202ENST00000393577 MBLAC1A4D2B0 266 aaPredicted RBP26.22■■□□□ 1.79
HMGA2-202ENST00000393577 RRN3P2A6NIE6 340 aa26.22■■□□□ 1.79
HMGA2-202ENST00000393577 JAK2O60674 1132 aa26.22■■□□□ 1.79
HMGA2-202ENST00000393577 INF2Q27J81 1249 aa26.22■■□□□ 1.79
HMGA2-202ENST00000393577 TAF2Q6P1X5 1199 aa26.22■■□□□ 1.79
HMGA2-202ENST00000393577 TNPO1Q92973 898 aaKnown RBP26.22■■□□□ 1.79
HMGA2-202ENST00000393577 ZBTB10Q96DT7 871 aa26.22■■□□□ 1.79
HMGA2-202ENST00000393577 CDX2Q99626 313 aaPredicted RBP26.22■■□□□ 1.79
HMGA2-202ENST00000393577 NKX2-4Q9H2Z4 354 aa26.22■■□□□ 1.79
HMGA2-202ENST00000393577 ZNF576Q9H609 170 aa26.22■■□□□ 1.79
HMGA2-202ENST00000393577 LIMCH1Q9UPQ0 1083 aa26.22■■□□□ 1.79
HMGA2-202ENST00000393577 CCDC194A0A1B0GVG4 234 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 POTEB3A0JP26 581 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 KCNJ6P48051 423 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 SLC26A2P50443 739 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 WDR5P61964 334 aaKnown RBP26.21■■□□□ 1.79
HMGA2-202ENST00000393577 Q4G0T1 1027 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 SWSAP1Q6NVH7 229 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 PDXDC2PQ6P474 469 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 POTEBQ6S5H4 581 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 SMAP1Q8IYB5 467 aaPredicted RBP26.21■■□□□ 1.79
HMGA2-202ENST00000393577 OXER1Q8TDS5 423 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 TRAPPC12Q8WVT3 735 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 WDR81Q562E7 1941 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 CDH23Q9H251 3354 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 SIP14410 1827 aa26.21■■□□□ 1.79
HMGA2-202ENST00000393577 COL6A3P12111 3177 aa26.2■■□□□ 1.79
HMGA2-202ENST00000393577 MYOGP15173 224 aa26.2■■□□□ 1.78
HMGA2-202ENST00000393577 PHOSPHO2Q8TCD6 241 aa26.2■■□□□ 1.78
HMGA2-202ENST00000393577 SLC5A5Q92911 643 aa26.2■■□□□ 1.78
HMGA2-202ENST00000393577 GJA10Q969M2 543 aa26.2■■□□□ 1.78
HMGA2-202ENST00000393577 OSBPL7Q9BZF2 842 aa26.2■■□□□ 1.78
HMGA2-202ENST00000393577 SAMM50Q9Y512 469 aa26.2■■□□□ 1.78
HMGA2-202ENST00000393577 PCDHA11Q9Y5I1 949 aa26.2■■□□□ 1.78
HMGA2-202ENST00000393577 MICAL3Q7RTP6 2002 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 CYP3A7-CYP3A51PA0A087WV96 503 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 GAS7O60861 476 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 PSAPP07602 524 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 CYP3A7P24462 503 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 RBM25P49756 843 aaKnown RBP26.19■■□□□ 1.78
HMGA2-202ENST00000393577 FOSBP53539 338 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 LETM2Q2VYF4 491 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 FAM26DQ5JW98 314 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 LRCH2Q5VUJ6 765 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 MOXD1Q6UVY6 613 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 PIK3AP1Q6ZUJ8 805 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 RPAINQ86UA6 219 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 RSPH3Q86UC2 560 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 CCDC83Q8IWF9 413 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 DBF4BQ8NFT6 615 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 ATP8B4Q8TF62 1192 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 DNAJB3Q8WWF6 145 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 MYLIPQ8WY64 445 aa26.19■■□□□ 1.78
HMGA2-202ENST00000393577 RIT2Q99578 217 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms