RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 KCNH7Q9NS40 1196 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 NTMQ9P121 344 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 B4GALT6Q9UBX8 382 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 CROTQ9UKG9 612 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 ZKSCAN5Q9Y2L8 839 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 B3GALT1Q9Y5Z6 326 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 SH3D21A4FU49 640 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 FOXP2O15409 715 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 PDE8AO60658 829 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 GAS7O60861 476 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 MYCLP1P12525 358 aaPredicted RBP4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 HERVK_113P62684 666 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 PFKPQ01813 784 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 DLX2Q07687 328 aaPredicted RBP4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 TMEM132BQ14DG7 1078 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 SEC23AQ15436 765 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 ZNF174Q15697 407 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 SKIDA1Q1XH10 827 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 PRAMEF18Q5VWM3 479 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 ADGRG2Q8IZP9 1017 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 ZNF526Q8TF50 670 aaPredicted RBP4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 DLG3Q92796 817 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 ORAI3Q9BRQ5 295 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 PCIF1Q9H4Z3 704 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 SLC39A2Q9NP94 309 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 SPATA6Q9NWH7 488 aaPredicted RBP4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 ARHGAP20Q9P2F6 1191 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 WASF3Q9UPY6 502 aa4.41□□□□□ -1.7
RNU6-550P-201ENST00000391057 A0A087X0B3 334 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 A0A1B0GTL3 188 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 FAM83GA6ND36 823 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 GSG1L2A8MUP6 293 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 FBXO21O94952 628 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 MMEP08473 750 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 ZBTB48P10074 688 aaPredicted RBP4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 PTGS1P23219 599 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 RPL13P26373 211 aaKnown RBP4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 AOAHP28039 575 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 SDHAP31040 664 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 GLRBP48167 497 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 SARSP49591 514 aaKnown RBP4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 KIF11P52732 1056 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 SART3Q15020 963 aaKnown RBP4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 PCBP1Q15365 356 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 EGFLAMQ63HQ2 1017 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 CC2D1AQ6P1N0 951 aaPredicted RBP4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 LCNL1Q6ZST4 164 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 KIF18BQ86Y91 864 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 SIAH1Q8IUQ4 282 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 SP8Q8IXZ3 490 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 CARFQ8N187 725 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 KIAA1958Q8N8K9 716 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 HIPK4Q8NE63 616 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 OR2W6PQ8NHA6 318 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 IGDCC4Q8TDY8 1250 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 MTFR1LQ9H019 292 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 ZFP69BQ9UJL9 534 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 MAPRE3Q9UPY8 281 aa4.4□□□□□ -1.71
RNU6-550P-201ENST00000391057 ZNF891A8MT65 544 aaPredicted RBP4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 F2P00734 622 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 MC4RP32245 332 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 SOX5P35711 763 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 SEPT7Q16181 437 aaKnown RBP4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 SKOR2Q2VWA4 1001 aaPredicted RBP4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 PRR31Q5SQ13 230 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 PHF19Q5T6S3 580 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 TRMT10BQ6PF06 316 aaKnown RBP4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 THNSL2Q86YJ6 484 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 NXPE1Q8N323 547 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 TP53I13Q8NBR0 393 aaPredicted RBP4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 LEO1Q8WVC0 666 aaPredicted RBP4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 ASB15Q8WXK1 588 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 GBP4Q96PP9 640 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 SPATA25Q9BR10 227 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 L2HGDHQ9H9P8 463 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 INCENPQ9NQS7 918 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 ACSS2Q9NR19 701 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 IFT57Q9NWB7 429 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 ASB1Q9Y576 335 aa4.39□□□□□ -1.71
RNU6-550P-201ENST00000391057 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 RASSF10A6NK89 507 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 DDX3XO00571 662 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 DVL2O14641 736 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 CHGBP05060 677 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 ATP2A2P16615 1042 aaKnown RBP4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 ZNF28P17035 718 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 BMP7P18075 431 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 KCNC1P48547 511 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 MASP1P48740 699 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 FNTBP49356 437 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 SCNN1BP51168 640 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 SLURP1P55000 103 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 IL2P60568 153 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 DSG1Q02413 1049 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 RTP5Q14D33 572 aa4.38□□□□□ -1.71
RNU6-550P-201ENST00000391057 SMAD2Q15796 467 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms