RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 TIMP1P01033 207 aa16.96■□□□□ 0.31
IGHV3-53-201ENST00000390627 MCM7P33993 719 aa16.96■□□□□ 0.31
IGHV3-53-201ENST00000390627 TTC38Q5R3I4 469 aa16.96■□□□□ 0.31
IGHV3-53-201ENST00000390627 PDXDC2PQ6P474 469 aa16.96■□□□□ 0.31
IGHV3-53-201ENST00000390627 MIER3Q7Z3K6 550 aa16.96■□□□□ 0.31
IGHV3-53-201ENST00000390627 CCDC60Q8IWA6 550 aaPredicted RBP16.96■□□□□ 0.31
IGHV3-53-201ENST00000390627 CCDC155Q8N6L0 562 aa16.96■□□□□ 0.31
IGHV3-53-201ENST00000390627 RNPEPQ9H4A4 650 aa16.96■□□□□ 0.31
IGHV3-53-201ENST00000390627 LTBP2Q14767 1821 aa16.96■□□□□ 0.3
IGHV3-53-201ENST00000390627 WNT7AO00755 349 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 CYP2C9P11712 490 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 HOXC8P31273 242 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 MAGEA10P43363 369 aaPredicted RBP16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 PPFIA1Q13136 1202 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 PPP2R5CQ13362 524 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 BFSP2Q13515 415 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 SWSAP1Q6NVH7 229 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 B3GNT9Q6UX72 402 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 CAGE1Q8TC20 777 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 HAS1Q92839 578 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 NOC4LQ9BVI4 516 aaKnown RBP16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 PPP1R12CQ9BZL4 782 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 IGSF9BQ9UPX0 1349 aa16.95■□□□□ 0.3
IGHV3-53-201ENST00000390627 POTEB3A0JP26 581 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 RRN3P2A6NIE6 340 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 MDM2Q00987 491 aaPredicted RBP16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 PTK7Q13308 1070 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 PLCB4Q15147 1175 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 RILPL1Q5EBL4 403 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 POTEBQ6S5H4 581 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 CKAP2LQ8IYA6 745 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 LMBR1Q8WVP7 490 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 BADQ92934 168 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 ATP6V0A1Q93050 837 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 FAM167AQ96KS9 214 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 GDF15Q99988 308 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 SETD4Q9NVD3 440 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 GABBR1Q9UBS5 961 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 VAV3Q9UKW4 847 aa16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 MAFBQ9Y5Q3 323 aaPredicted RBP16.94■□□□□ 0.3
IGHV3-53-201ENST00000390627 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 HBP1O60381 514 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 ITGB8P26012 769 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 ZNF174Q15697 407 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 GRIK4Q16099 956 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 MFSD5Q6N075 450 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 CHRDL2Q6WN34 429 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 BRAPQ7Z569 592 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 TMEM199Q8N511 208 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 RETREG2Q8NC44 543 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 ATP8B4Q8TF62 1192 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 MTMR9Q96QG7 549 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 CTAGE1Q96RT6 745 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 PCDHA12Q9UN75 941 aa16.93■□□□□ 0.3
IGHV3-53-201ENST00000390627 CEP290O15078 2479 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 TREHO43280 583 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 OR52Z1P0C646 297 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 INSRRP14616 1297 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 SYT1P21579 422 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 CYP2C18P33260 490 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 BMP8BP34820 402 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 FPGSQ05932 587 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 RBL2Q08999 1139 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 HIC1Q14526 733 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 SERINC5Q86VE9 423 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 BBXQ8WY36 941 aaPredicted RBP16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 TMEM60Q9H2L4 133 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 TTC12Q9H892 705 aaPredicted RBP16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 TUBE1Q9UJT0 475 aa16.92■□□□□ 0.3
IGHV3-53-201ENST00000390627 MYH9P35579 1960 aaKnown RBP16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 COL1A2P08123 1366 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 KAT6AQ92794 2004 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 DKC1O60832 514 aaKnown RBP eCLIP16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 PDIA4P13667 645 aaKnown RBP16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 TXKP42681 527 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 TOB1P50616 345 aaPredicted RBP16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 IGBP1P78318 339 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 ADAM17P78536 824 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 PPIGQ13427 754 aaKnown RBP eCLIP16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 EPHA7Q15375 998 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 NCAPH2Q6IBW4 605 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 DHX38Q92620 1227 aaKnown RBP16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 UBE2OQ9C0C9 1292 aaKnown RBP16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 PCDH10Q9P2E7 1040 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 CEP131Q9UPN4 1083 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 UMODL1Q5DID0 1318 aa16.91■□□□□ 0.3
IGHV3-53-201ENST00000390627 EML1O00423 815 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 LAD1O00515 517 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 CAND2O75155 1236 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 OATP04181 439 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 RPLP2P05387 115 aaKnown RBP16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 ATP4AP20648 1035 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 CCL23P55773 120 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 PSMC5P62195 406 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 PRKCEQ02156 737 aa16.9■□□□□ 0.3
IGHV3-53-201ENST00000390627 SPIRE1Q08AE8 756 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms